Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6578 | 19957;19958;19959 | chr2:178727846;178727845;178727844 | chr2:179592573;179592572;179592571 |
N2AB | 6261 | 19006;19007;19008 | chr2:178727846;178727845;178727844 | chr2:179592573;179592572;179592571 |
N2A | 5334 | 16225;16226;16227 | chr2:178727846;178727845;178727844 | chr2:179592573;179592572;179592571 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs2079625925 | None | 0.002 | N | 0.072 | 0.197 | 0.284150004643 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 9.43E-05 | 0 | 0 | 0 | 0 |
V/L | rs2079625925 | None | 0.002 | N | 0.072 | 0.197 | 0.284150004643 | gnomAD-4.0.0 | 6.57618E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.42685E-05 | 0 | 0 | 0 | 0 |
V/M | None | None | 0.139 | N | 0.127 | 0.207 | 0.342631996419 | gnomAD-4.0.0 | 1.6504E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.9427E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1387 | likely_benign | 0.1412 | benign | -1.139 | Destabilizing | 0.139 | N | 0.153 | neutral | N | 0.491114134 | None | None | N |
V/C | 0.7179 | likely_pathogenic | 0.7245 | pathogenic | -0.778 | Destabilizing | 0.995 | D | 0.317 | neutral | None | None | None | None | N |
V/D | 0.1656 | likely_benign | 0.1598 | benign | -0.789 | Destabilizing | 0.543 | D | 0.386 | neutral | None | None | None | None | N |
V/E | 0.0998 | likely_benign | 0.0945 | benign | -0.774 | Destabilizing | 0.002 | N | 0.135 | neutral | N | 0.417771169 | None | None | N |
V/F | 0.1585 | likely_benign | 0.1568 | benign | -0.776 | Destabilizing | 0.893 | D | 0.39 | neutral | None | None | None | None | N |
V/G | 0.1579 | likely_benign | 0.1548 | benign | -1.45 | Destabilizing | 0.642 | D | 0.371 | neutral | N | 0.502235205 | None | None | N |
V/H | 0.3647 | ambiguous | 0.374 | ambiguous | -0.861 | Destabilizing | 0.944 | D | 0.386 | neutral | None | None | None | None | N |
V/I | 0.0836 | likely_benign | 0.0865 | benign | -0.391 | Destabilizing | 0.329 | N | 0.233 | neutral | None | None | None | None | N |
V/K | 0.1944 | likely_benign | 0.1968 | benign | -0.977 | Destabilizing | 0.031 | N | 0.191 | neutral | None | None | None | None | N |
V/L | 0.1257 | likely_benign | 0.133 | benign | -0.391 | Destabilizing | 0.002 | N | 0.072 | neutral | N | 0.456790917 | None | None | N |
V/M | 0.1272 | likely_benign | 0.1316 | benign | -0.381 | Destabilizing | 0.139 | N | 0.127 | neutral | N | 0.485225484 | None | None | N |
V/N | 0.1791 | likely_benign | 0.1867 | benign | -0.854 | Destabilizing | 0.704 | D | 0.477 | neutral | None | None | None | None | N |
V/P | 0.6018 | likely_pathogenic | 0.6494 | pathogenic | -0.605 | Destabilizing | 0.828 | D | 0.471 | neutral | None | None | None | None | N |
V/Q | 0.144 | likely_benign | 0.1453 | benign | -0.961 | Destabilizing | 0.543 | D | 0.442 | neutral | None | None | None | None | N |
V/R | 0.1889 | likely_benign | 0.1937 | benign | -0.5 | Destabilizing | 0.543 | D | 0.477 | neutral | None | None | None | None | N |
V/S | 0.1471 | likely_benign | 0.1537 | benign | -1.378 | Destabilizing | 0.085 | N | 0.197 | neutral | None | None | None | None | N |
V/T | 0.1352 | likely_benign | 0.1488 | benign | -1.245 | Destabilizing | 0.031 | N | 0.091 | neutral | None | None | None | None | N |
V/W | 0.6943 | likely_pathogenic | 0.6976 | pathogenic | -0.98 | Destabilizing | 0.995 | D | 0.395 | neutral | None | None | None | None | N |
V/Y | 0.4273 | ambiguous | 0.4514 | ambiguous | -0.661 | Destabilizing | 0.981 | D | 0.364 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.