Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6585 | 19978;19979;19980 | chr2:178727825;178727824;178727823 | chr2:179592552;179592551;179592550 |
N2AB | 6268 | 19027;19028;19029 | chr2:178727825;178727824;178727823 | chr2:179592552;179592551;179592550 |
N2A | 5341 | 16246;16247;16248 | chr2:178727825;178727824;178727823 | chr2:179592552;179592551;179592550 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.576 | N | 0.343 | 0.258 | 0.365892764245 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6525 | likely_pathogenic | 0.6452 | pathogenic | -0.978 | Destabilizing | 1.0 | D | 0.565 | neutral | None | None | None | None | N |
A/D | 0.6286 | likely_pathogenic | 0.561 | ambiguous | -1.308 | Destabilizing | 0.997 | D | 0.637 | neutral | N | 0.49752375 | None | None | N |
A/E | 0.5741 | likely_pathogenic | 0.5371 | ambiguous | -1.296 | Destabilizing | 0.998 | D | 0.645 | neutral | None | None | None | None | N |
A/F | 0.6123 | likely_pathogenic | 0.5688 | pathogenic | -0.879 | Destabilizing | 0.998 | D | 0.637 | neutral | None | None | None | None | N |
A/G | 0.1991 | likely_benign | 0.1805 | benign | -1.237 | Destabilizing | 0.989 | D | 0.518 | neutral | N | 0.496763281 | None | None | N |
A/H | 0.8105 | likely_pathogenic | 0.7859 | pathogenic | -1.432 | Destabilizing | 1.0 | D | 0.585 | neutral | None | None | None | None | N |
A/I | 0.3614 | ambiguous | 0.3378 | benign | -0.237 | Destabilizing | 0.967 | D | 0.604 | neutral | None | None | None | None | N |
A/K | 0.8117 | likely_pathogenic | 0.7972 | pathogenic | -1.269 | Destabilizing | 0.998 | D | 0.641 | neutral | None | None | None | None | N |
A/L | 0.3927 | ambiguous | 0.3561 | ambiguous | -0.237 | Destabilizing | 0.967 | D | 0.459 | neutral | None | None | None | None | N |
A/M | 0.4171 | ambiguous | 0.4067 | ambiguous | -0.263 | Destabilizing | 0.999 | D | 0.593 | neutral | None | None | None | None | N |
A/N | 0.5984 | likely_pathogenic | 0.5454 | ambiguous | -1.072 | Destabilizing | 0.998 | D | 0.635 | neutral | None | None | None | None | N |
A/P | 0.8618 | likely_pathogenic | 0.8509 | pathogenic | -0.426 | Destabilizing | 0.999 | D | 0.641 | neutral | N | 0.49727026 | None | None | N |
A/Q | 0.6705 | likely_pathogenic | 0.6567 | pathogenic | -1.166 | Destabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | N |
A/R | 0.7434 | likely_pathogenic | 0.7182 | pathogenic | -0.997 | Destabilizing | 0.998 | D | 0.632 | neutral | None | None | None | None | N |
A/S | 0.1736 | likely_benign | 0.1509 | benign | -1.461 | Destabilizing | 0.956 | D | 0.495 | neutral | N | 0.503374142 | None | None | N |
A/T | 0.1471 | likely_benign | 0.1352 | benign | -1.35 | Destabilizing | 0.576 | D | 0.343 | neutral | N | 0.504566221 | None | None | N |
A/V | 0.1526 | likely_benign | 0.1431 | benign | -0.426 | Destabilizing | 0.37 | N | 0.239 | neutral | N | 0.366435484 | None | None | N |
A/W | 0.9248 | likely_pathogenic | 0.9148 | pathogenic | -1.303 | Destabilizing | 1.0 | D | 0.568 | neutral | None | None | None | None | N |
A/Y | 0.7707 | likely_pathogenic | 0.7475 | pathogenic | -0.869 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.