Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6586 | 19981;19982;19983 | chr2:178727822;178727821;178727820 | chr2:179592549;179592548;179592547 |
N2AB | 6269 | 19030;19031;19032 | chr2:178727822;178727821;178727820 | chr2:179592549;179592548;179592547 |
N2A | 5342 | 16249;16250;16251 | chr2:178727822;178727821;178727820 | chr2:179592549;179592548;179592547 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs896710187 | None | 0.324 | N | 0.359 | 0.136 | 0.642625386947 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/T | rs896710187 | None | 0.324 | N | 0.359 | 0.136 | 0.642625386947 | gnomAD-4.0.0 | 6.21717E-06 | None | None | None | None | N | None | 1.33837E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 7.64588E-06 | 0 | 0 |
I/V | None | None | None | N | 0.173 | 0.085 | 0.42573502686 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2884 | likely_benign | 0.2034 | benign | -0.559 | Destabilizing | 0.116 | N | 0.369 | neutral | None | None | None | None | N |
I/C | 0.7392 | likely_pathogenic | 0.6448 | pathogenic | -0.613 | Destabilizing | 0.944 | D | 0.361 | neutral | None | None | None | None | N |
I/D | 0.5456 | ambiguous | 0.4043 | ambiguous | -0.041 | Destabilizing | 0.818 | D | 0.496 | neutral | None | None | None | None | N |
I/E | 0.4681 | ambiguous | 0.3684 | ambiguous | -0.129 | Destabilizing | 0.818 | D | 0.495 | neutral | None | None | None | None | N |
I/F | 0.1559 | likely_benign | 0.1198 | benign | -0.555 | Destabilizing | 0.69 | D | 0.334 | neutral | None | None | None | None | N |
I/G | 0.5648 | likely_pathogenic | 0.4156 | ambiguous | -0.725 | Destabilizing | 0.818 | D | 0.479 | neutral | None | None | None | None | N |
I/H | 0.4597 | ambiguous | 0.3404 | ambiguous | -0.03 | Destabilizing | 0.981 | D | 0.481 | neutral | None | None | None | None | N |
I/K | 0.312 | likely_benign | 0.227 | benign | -0.293 | Destabilizing | 0.773 | D | 0.489 | neutral | N | 0.500501622 | None | None | N |
I/L | 0.0967 | likely_benign | 0.0814 | benign | -0.246 | Destabilizing | 0.001 | N | 0.163 | neutral | N | 0.390912641 | None | None | N |
I/M | 0.1102 | likely_benign | 0.0916 | benign | -0.339 | Destabilizing | 0.627 | D | 0.359 | neutral | N | 0.499984334 | None | None | N |
I/N | 0.2174 | likely_benign | 0.1324 | benign | -0.111 | Destabilizing | 0.932 | D | 0.49 | neutral | None | None | None | None | N |
I/P | 0.5843 | likely_pathogenic | 0.4788 | ambiguous | -0.317 | Destabilizing | 0.932 | D | 0.494 | neutral | None | None | None | None | N |
I/Q | 0.374 | ambiguous | 0.2758 | benign | -0.318 | Destabilizing | 0.932 | D | 0.487 | neutral | None | None | None | None | N |
I/R | 0.2675 | likely_benign | 0.1916 | benign | 0.229 | Stabilizing | 0.773 | D | 0.491 | neutral | N | 0.492306213 | None | None | N |
I/S | 0.2432 | likely_benign | 0.1635 | benign | -0.579 | Destabilizing | 0.69 | D | 0.472 | neutral | None | None | None | None | N |
I/T | 0.244 | likely_benign | 0.1637 | benign | -0.556 | Destabilizing | 0.324 | N | 0.359 | neutral | N | 0.481435858 | None | None | N |
I/V | 0.076 | likely_benign | 0.0646 | benign | -0.317 | Destabilizing | None | N | 0.173 | neutral | N | 0.455366765 | None | None | N |
I/W | 0.7552 | likely_pathogenic | 0.6937 | pathogenic | -0.582 | Destabilizing | 0.981 | D | 0.557 | neutral | None | None | None | None | N |
I/Y | 0.4714 | ambiguous | 0.395 | ambiguous | -0.323 | Destabilizing | 0.818 | D | 0.385 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.