Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6595 | 20008;20009;20010 | chr2:178727795;178727794;178727793 | chr2:179592522;179592521;179592520 |
N2AB | 6278 | 19057;19058;19059 | chr2:178727795;178727794;178727793 | chr2:179592522;179592521;179592520 |
N2A | 5351 | 16276;16277;16278 | chr2:178727795;178727794;178727793 | chr2:179592522;179592521;179592520 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1305423472 | -1.364 | 0.811 | N | 0.702 | 0.254 | 0.273503213844 | gnomAD-2.1.1 | 7.16E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.13E-05 | None | 0 | None | 4.01E-05 | 0 | 0 |
A/T | rs1305423472 | -1.364 | 0.811 | N | 0.702 | 0.254 | 0.273503213844 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 9.43E-05 | 0 | 0 | 0 | 0 |
A/T | rs1305423472 | -1.364 | 0.811 | N | 0.702 | 0.254 | 0.273503213844 | gnomAD-4.0.0 | 2.48042E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.45891E-05 | None | 1.56284E-05 | 0 | 8.48043E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5426 | ambiguous | 0.5773 | pathogenic | -0.329 | Destabilizing | 0.999 | D | 0.686 | prob.neutral | None | None | None | None | N |
A/D | 0.8618 | likely_pathogenic | 0.8877 | pathogenic | -1.718 | Destabilizing | 0.976 | D | 0.801 | deleterious | None | None | None | None | N |
A/E | 0.8543 | likely_pathogenic | 0.8785 | pathogenic | -1.481 | Destabilizing | 0.968 | D | 0.801 | deleterious | N | 0.466683252 | None | None | N |
A/F | 0.6981 | likely_pathogenic | 0.7324 | pathogenic | -0.332 | Destabilizing | 0.988 | D | 0.821 | deleterious | None | None | None | None | N |
A/G | 0.1763 | likely_benign | 0.1855 | benign | -1.169 | Destabilizing | 0.011 | N | 0.406 | neutral | N | 0.452381522 | None | None | N |
A/H | 0.9215 | likely_pathogenic | 0.9391 | pathogenic | -1.779 | Destabilizing | 0.999 | D | 0.838 | deleterious | None | None | None | None | N |
A/I | 0.4334 | ambiguous | 0.4703 | ambiguous | 0.715 | Stabilizing | 0.952 | D | 0.799 | deleterious | None | None | None | None | N |
A/K | 0.9663 | likely_pathogenic | 0.976 | pathogenic | -0.557 | Destabilizing | 0.976 | D | 0.795 | deleterious | None | None | None | None | N |
A/L | 0.3898 | ambiguous | 0.4149 | ambiguous | 0.715 | Stabilizing | 0.851 | D | 0.757 | deleterious | None | None | None | None | N |
A/M | 0.4001 | ambiguous | 0.4307 | ambiguous | 0.492 | Stabilizing | 0.997 | D | 0.776 | deleterious | None | None | None | None | N |
A/N | 0.6973 | likely_pathogenic | 0.74 | pathogenic | -0.915 | Destabilizing | 0.976 | D | 0.816 | deleterious | None | None | None | None | N |
A/P | 0.9137 | likely_pathogenic | 0.9399 | pathogenic | 0.299 | Stabilizing | 0.984 | D | 0.787 | deleterious | N | 0.466683252 | None | None | N |
A/Q | 0.8806 | likely_pathogenic | 0.908 | pathogenic | -0.621 | Destabilizing | 0.988 | D | 0.766 | deleterious | None | None | None | None | N |
A/R | 0.9437 | likely_pathogenic | 0.9552 | pathogenic | -0.915 | Destabilizing | 0.988 | D | 0.785 | deleterious | None | None | None | None | N |
A/S | 0.1419 | likely_benign | 0.1548 | benign | -1.314 | Destabilizing | 0.437 | N | 0.436 | neutral | N | 0.412881771 | None | None | N |
A/T | 0.112 | likely_benign | 0.123 | benign | -0.943 | Destabilizing | 0.811 | D | 0.702 | prob.neutral | N | 0.500519398 | None | None | N |
A/V | 0.176 | likely_benign | 0.1958 | benign | 0.299 | Stabilizing | 0.059 | N | 0.467 | neutral | N | 0.413358987 | None | None | N |
A/W | 0.9568 | likely_pathogenic | 0.9663 | pathogenic | -1.199 | Destabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | N |
A/Y | 0.833 | likely_pathogenic | 0.8602 | pathogenic | -0.541 | Destabilizing | 0.996 | D | 0.841 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.