Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6605 | 20038;20039;20040 | chr2:178727765;178727764;178727763 | chr2:179592492;179592491;179592490 |
N2AB | 6288 | 19087;19088;19089 | chr2:178727765;178727764;178727763 | chr2:179592492;179592491;179592490 |
N2A | 5361 | 16306;16307;16308 | chr2:178727765;178727764;178727763 | chr2:179592492;179592491;179592490 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.876 | D | 0.595 | 0.447 | 0.498830998431 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5952 | likely_pathogenic | 0.6368 | pathogenic | -1.904 | Destabilizing | 0.821 | D | 0.552 | neutral | None | None | None | None | I |
I/C | 0.7741 | likely_pathogenic | 0.7855 | pathogenic | -1.055 | Destabilizing | 0.998 | D | 0.7 | prob.neutral | None | None | None | None | I |
I/D | 0.9323 | likely_pathogenic | 0.9331 | pathogenic | -1.447 | Destabilizing | 0.987 | D | 0.795 | deleterious | None | None | None | None | I |
I/E | 0.8477 | likely_pathogenic | 0.8476 | pathogenic | -1.349 | Destabilizing | 0.983 | D | 0.797 | deleterious | None | None | None | None | I |
I/F | 0.2345 | likely_benign | 0.2365 | benign | -1.093 | Destabilizing | 0.027 | N | 0.392 | neutral | None | None | None | None | I |
I/G | 0.7951 | likely_pathogenic | 0.8233 | pathogenic | -2.326 | Highly Destabilizing | 0.957 | D | 0.778 | deleterious | None | None | None | None | I |
I/H | 0.8248 | likely_pathogenic | 0.8298 | pathogenic | -1.557 | Destabilizing | 0.999 | D | 0.812 | deleterious | None | None | None | None | I |
I/K | 0.7691 | likely_pathogenic | 0.767 | pathogenic | -1.408 | Destabilizing | 0.634 | D | 0.797 | deleterious | D | 0.545474321 | None | None | I |
I/L | 0.151 | likely_benign | 0.159 | benign | -0.76 | Destabilizing | 0.043 | N | 0.42 | neutral | D | 0.538758939 | None | None | I |
I/M | 0.1223 | likely_benign | 0.1178 | benign | -0.567 | Destabilizing | 0.876 | D | 0.595 | neutral | D | 0.533446453 | None | None | I |
I/N | 0.5574 | ambiguous | 0.5612 | ambiguous | -1.351 | Destabilizing | 0.987 | D | 0.813 | deleterious | None | None | None | None | I |
I/P | 0.8489 | likely_pathogenic | 0.8827 | pathogenic | -1.114 | Destabilizing | 0.994 | D | 0.814 | deleterious | None | None | None | None | I |
I/Q | 0.7542 | likely_pathogenic | 0.7563 | pathogenic | -1.389 | Destabilizing | 0.985 | D | 0.815 | deleterious | None | None | None | None | I |
I/R | 0.6896 | likely_pathogenic | 0.6826 | pathogenic | -0.937 | Destabilizing | 0.959 | D | 0.816 | deleterious | D | 0.545474321 | None | None | I |
I/S | 0.5734 | likely_pathogenic | 0.5857 | pathogenic | -2.026 | Highly Destabilizing | 0.918 | D | 0.739 | prob.delet. | None | None | None | None | I |
I/T | 0.4837 | ambiguous | 0.4953 | ambiguous | -1.8 | Destabilizing | 0.016 | N | 0.429 | neutral | N | 0.518469296 | None | None | I |
I/V | 0.0856 | likely_benign | 0.0972 | benign | -1.114 | Destabilizing | None | N | 0.203 | neutral | N | 0.428865236 | None | None | I |
I/W | 0.8534 | likely_pathogenic | 0.8387 | pathogenic | -1.294 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
I/Y | 0.618 | likely_pathogenic | 0.6094 | pathogenic | -1.046 | Destabilizing | 0.646 | D | 0.725 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.