Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6611 | 20056;20057;20058 | chr2:178727747;178727746;178727745 | chr2:179592474;179592473;179592472 |
N2AB | 6294 | 19105;19106;19107 | chr2:178727747;178727746;178727745 | chr2:179592474;179592473;179592472 |
N2A | 5367 | 16324;16325;16326 | chr2:178727747;178727746;178727745 | chr2:179592474;179592473;179592472 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.006 | N | 0.315 | 0.146 | 0.0762999501168 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
D/N | None | None | 0.864 | N | 0.462 | 0.236 | 0.124217242631 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1172 | likely_benign | 0.1279 | benign | -0.201 | Destabilizing | 0.477 | N | 0.423 | neutral | N | 0.461732502 | None | None | I |
D/C | 0.481 | ambiguous | 0.5302 | ambiguous | -0.16 | Destabilizing | 0.995 | D | 0.569 | neutral | None | None | None | None | I |
D/E | 0.1262 | likely_benign | 0.1432 | benign | -0.289 | Destabilizing | 0.006 | N | 0.301 | neutral | N | 0.508194732 | None | None | I |
D/F | 0.5093 | ambiguous | 0.5402 | ambiguous | -0.065 | Destabilizing | 0.995 | D | 0.517 | neutral | None | None | None | None | I |
D/G | 0.0875 | likely_benign | 0.0898 | benign | -0.376 | Destabilizing | 0.006 | N | 0.315 | neutral | N | 0.39921068 | None | None | I |
D/H | 0.1817 | likely_benign | 0.2025 | benign | 0.388 | Stabilizing | 0.98 | D | 0.445 | neutral | N | 0.491700041 | None | None | I |
D/I | 0.3051 | likely_benign | 0.3472 | ambiguous | 0.209 | Stabilizing | 0.945 | D | 0.546 | neutral | None | None | None | None | I |
D/K | 0.2018 | likely_benign | 0.2144 | benign | 0.354 | Stabilizing | 0.809 | D | 0.459 | neutral | None | None | None | None | I |
D/L | 0.3429 | ambiguous | 0.3718 | ambiguous | 0.209 | Stabilizing | 0.894 | D | 0.54 | neutral | None | None | None | None | I |
D/M | 0.4474 | ambiguous | 0.5013 | ambiguous | 0.128 | Stabilizing | 0.995 | D | 0.543 | neutral | None | None | None | None | I |
D/N | 0.0672 | likely_benign | 0.0721 | benign | -0.043 | Destabilizing | 0.864 | D | 0.462 | neutral | N | 0.49033969 | None | None | I |
D/P | 0.6332 | likely_pathogenic | 0.6427 | pathogenic | 0.093 | Stabilizing | 0.945 | D | 0.471 | neutral | None | None | None | None | I |
D/Q | 0.2188 | likely_benign | 0.2454 | benign | None | Stabilizing | 0.809 | D | 0.477 | neutral | None | None | None | None | I |
D/R | 0.2253 | likely_benign | 0.237 | benign | 0.639 | Stabilizing | 0.894 | D | 0.445 | neutral | None | None | None | None | I |
D/S | 0.0834 | likely_benign | 0.0923 | benign | -0.132 | Destabilizing | 0.547 | D | 0.425 | neutral | None | None | None | None | I |
D/T | 0.1558 | likely_benign | 0.1777 | benign | 0.016 | Stabilizing | 0.894 | D | 0.471 | neutral | None | None | None | None | I |
D/V | 0.2029 | likely_benign | 0.2281 | benign | 0.093 | Stabilizing | 0.864 | D | 0.556 | neutral | N | 0.49220702 | None | None | I |
D/W | 0.8095 | likely_pathogenic | 0.8265 | pathogenic | 0.077 | Stabilizing | 0.995 | D | 0.552 | neutral | None | None | None | None | I |
D/Y | 0.21 | likely_benign | 0.2245 | benign | 0.182 | Stabilizing | 0.993 | D | 0.523 | neutral | N | 0.480597225 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.