Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6621 | 20086;20087;20088 | chr2:178727717;178727716;178727715 | chr2:179592444;179592443;179592442 |
N2AB | 6304 | 19135;19136;19137 | chr2:178727717;178727716;178727715 | chr2:179592444;179592443;179592442 |
N2A | 5377 | 16354;16355;16356 | chr2:178727717;178727716;178727715 | chr2:179592444;179592443;179592442 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs760276555 | -1.128 | 0.026 | N | 0.165 | 0.187 | 0.313518423057 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 8.88E-06 | 0 |
F/L | rs760276555 | -1.128 | 0.026 | N | 0.165 | 0.187 | 0.313518423057 | gnomAD-4.0.0 | 4.77693E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77393E-05 | None | 0 | 0 | 2.86067E-06 | 0 | 3.0259E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.6469 | likely_pathogenic | 0.5645 | pathogenic | -1.597 | Destabilizing | 0.851 | D | 0.531 | neutral | None | None | None | None | N |
F/C | 0.4834 | ambiguous | 0.4015 | ambiguous | -0.685 | Destabilizing | 0.999 | D | 0.624 | neutral | N | 0.500340771 | None | None | N |
F/D | 0.8217 | likely_pathogenic | 0.775 | pathogenic | 0.652 | Stabilizing | 0.976 | D | 0.613 | neutral | None | None | None | None | N |
F/E | 0.8309 | likely_pathogenic | 0.7757 | pathogenic | 0.698 | Stabilizing | 0.976 | D | 0.567 | neutral | None | None | None | None | N |
F/G | 0.8189 | likely_pathogenic | 0.7887 | pathogenic | -1.879 | Destabilizing | 0.919 | D | 0.515 | neutral | None | None | None | None | N |
F/H | 0.5443 | ambiguous | 0.5198 | ambiguous | -0.165 | Destabilizing | 0.999 | D | 0.593 | neutral | None | None | None | None | N |
F/I | 0.2825 | likely_benign | 0.2137 | benign | -0.8 | Destabilizing | 0.811 | D | 0.477 | neutral | N | 0.503774 | None | None | N |
F/K | 0.8355 | likely_pathogenic | 0.8027 | pathogenic | -0.466 | Destabilizing | 0.976 | D | 0.557 | neutral | None | None | None | None | N |
F/L | 0.8662 | likely_pathogenic | 0.8196 | pathogenic | -0.8 | Destabilizing | 0.026 | N | 0.165 | neutral | N | 0.500656337 | None | None | N |
F/M | 0.6163 | likely_pathogenic | 0.5436 | ambiguous | -0.599 | Destabilizing | 0.976 | D | 0.531 | neutral | None | None | None | None | N |
F/N | 0.6466 | likely_pathogenic | 0.5987 | pathogenic | -0.366 | Destabilizing | 0.976 | D | 0.623 | neutral | None | None | None | None | N |
F/P | 0.9916 | likely_pathogenic | 0.9911 | pathogenic | -1.051 | Destabilizing | 0.988 | D | 0.639 | neutral | None | None | None | None | N |
F/Q | 0.7588 | likely_pathogenic | 0.7033 | pathogenic | -0.417 | Destabilizing | 0.988 | D | 0.64 | neutral | None | None | None | None | N |
F/R | 0.6979 | likely_pathogenic | 0.663 | pathogenic | 0.086 | Stabilizing | 0.988 | D | 0.631 | neutral | None | None | None | None | N |
F/S | 0.4459 | ambiguous | 0.3651 | ambiguous | -1.281 | Destabilizing | 0.251 | N | 0.331 | neutral | N | 0.467389126 | None | None | N |
F/T | 0.5763 | likely_pathogenic | 0.4842 | ambiguous | -1.144 | Destabilizing | 0.851 | D | 0.501 | neutral | None | None | None | None | N |
F/V | 0.2785 | likely_benign | 0.2184 | benign | -1.051 | Destabilizing | 0.811 | D | 0.515 | neutral | N | 0.498232108 | None | None | N |
F/W | 0.643 | likely_pathogenic | 0.6515 | pathogenic | -0.094 | Destabilizing | 0.999 | D | 0.557 | neutral | None | None | None | None | N |
F/Y | 0.1477 | likely_benign | 0.1668 | benign | -0.246 | Destabilizing | 0.946 | D | 0.518 | neutral | N | 0.480417138 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.