Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6628 | 20107;20108;20109 | chr2:178727696;178727695;178727694 | chr2:179592423;179592422;179592421 |
N2AB | 6311 | 19156;19157;19158 | chr2:178727696;178727695;178727694 | chr2:179592423;179592422;179592421 |
N2A | 5384 | 16375;16376;16377 | chr2:178727696;178727695;178727694 | chr2:179592423;179592422;179592421 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | None | None | 0.937 | D | 0.607 | 0.507 | 0.476754456241 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.08 | likely_benign | 0.0785 | benign | -1.122 | Destabilizing | 0.123 | N | 0.448 | neutral | N | 0.500947126 | None | None | N |
T/C | 0.4612 | ambiguous | 0.4307 | ambiguous | -0.576 | Destabilizing | 0.999 | D | 0.603 | neutral | None | None | None | None | N |
T/D | 0.3555 | ambiguous | 0.3232 | benign | 0.069 | Stabilizing | 0.735 | D | 0.562 | neutral | None | None | None | None | N |
T/E | 0.2515 | likely_benign | 0.2346 | benign | 0.158 | Stabilizing | 0.902 | D | 0.559 | neutral | None | None | None | None | N |
T/F | 0.2358 | likely_benign | 0.2137 | benign | -0.981 | Destabilizing | 0.992 | D | 0.633 | neutral | None | None | None | None | N |
T/G | 0.2742 | likely_benign | 0.2656 | benign | -1.449 | Destabilizing | 0.959 | D | 0.579 | neutral | None | None | None | None | N |
T/H | 0.2475 | likely_benign | 0.2333 | benign | -1.498 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | N |
T/I | 0.1483 | likely_benign | 0.1398 | benign | -0.307 | Destabilizing | 0.03 | N | 0.372 | neutral | N | 0.450056945 | None | None | N |
T/K | 0.1933 | likely_benign | 0.1824 | benign | -0.333 | Destabilizing | 0.928 | D | 0.561 | neutral | None | None | None | None | N |
T/L | 0.1108 | likely_benign | 0.1059 | benign | -0.307 | Destabilizing | 0.728 | D | 0.517 | neutral | None | None | None | None | N |
T/M | 0.1052 | likely_benign | 0.1047 | benign | -0.171 | Destabilizing | 0.978 | D | 0.617 | neutral | None | None | None | None | N |
T/N | 0.1274 | likely_benign | 0.1216 | benign | -0.498 | Destabilizing | 0.677 | D | 0.517 | neutral | N | 0.467103911 | None | None | N |
T/P | 0.2892 | likely_benign | 0.2686 | benign | -0.547 | Destabilizing | 0.937 | D | 0.607 | neutral | D | 0.531616749 | None | None | N |
T/Q | 0.2 | likely_benign | 0.2038 | benign | -0.516 | Destabilizing | 0.977 | D | 0.623 | neutral | None | None | None | None | N |
T/R | 0.1393 | likely_benign | 0.1286 | benign | -0.312 | Destabilizing | 0.996 | D | 0.612 | neutral | None | None | None | None | N |
T/S | 0.1065 | likely_benign | 0.1033 | benign | -0.948 | Destabilizing | 0.011 | N | 0.205 | neutral | N | 0.402745788 | None | None | N |
T/V | 0.1182 | likely_benign | 0.1186 | benign | -0.547 | Destabilizing | 0.656 | D | 0.496 | neutral | None | None | None | None | N |
T/W | 0.5911 | likely_pathogenic | 0.5682 | pathogenic | -0.871 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
T/Y | 0.2608 | likely_benign | 0.2449 | benign | -0.608 | Destabilizing | 0.999 | D | 0.65 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.