Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6636 | 20131;20132;20133 | chr2:178727672;178727671;178727670 | chr2:179592399;179592398;179592397 |
N2AB | 6319 | 19180;19181;19182 | chr2:178727672;178727671;178727670 | chr2:179592399;179592398;179592397 |
N2A | 5392 | 16399;16400;16401 | chr2:178727672;178727671;178727670 | chr2:179592399;179592398;179592397 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1258812731 | -2.191 | 1.0 | D | 0.531 | 0.499 | 0.729420930906 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 1.1605E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/A | rs1258812731 | -2.191 | 1.0 | D | 0.531 | 0.499 | 0.729420930906 | gnomAD-4.0.0 | 4.77824E-06 | None | None | None | None | N | None | 0 | 6.86091E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3178 | likely_benign | 0.3004 | benign | -2.013 | Highly Destabilizing | 1.0 | D | 0.531 | neutral | D | 0.527211007 | None | None | N |
V/C | 0.9045 | likely_pathogenic | 0.8973 | pathogenic | -2.248 | Highly Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
V/D | 0.9517 | likely_pathogenic | 0.9562 | pathogenic | -2.84 | Highly Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
V/E | 0.9115 | likely_pathogenic | 0.9189 | pathogenic | -2.755 | Highly Destabilizing | 1.0 | D | 0.755 | deleterious | D | 0.561350077 | None | None | N |
V/F | 0.6377 | likely_pathogenic | 0.6563 | pathogenic | -1.565 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
V/G | 0.6466 | likely_pathogenic | 0.6466 | pathogenic | -2.4 | Highly Destabilizing | 1.0 | D | 0.747 | deleterious | D | 0.549993772 | None | None | N |
V/H | 0.9769 | likely_pathogenic | 0.9791 | pathogenic | -1.84 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
V/I | 0.1105 | likely_benign | 0.1055 | benign | -0.988 | Destabilizing | 0.966 | D | 0.5 | neutral | None | None | None | None | N |
V/K | 0.9483 | likely_pathogenic | 0.9554 | pathogenic | -1.767 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
V/L | 0.4808 | ambiguous | 0.4737 | ambiguous | -0.988 | Destabilizing | 0.997 | D | 0.546 | neutral | N | 0.498070409 | None | None | N |
V/M | 0.3566 | ambiguous | 0.3425 | ambiguous | -1.135 | Destabilizing | 1.0 | D | 0.787 | deleterious | D | 0.542738843 | None | None | N |
V/N | 0.8801 | likely_pathogenic | 0.8777 | pathogenic | -1.949 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
V/P | 0.8216 | likely_pathogenic | 0.8852 | pathogenic | -1.301 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
V/Q | 0.9237 | likely_pathogenic | 0.9279 | pathogenic | -2.071 | Highly Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
V/R | 0.9224 | likely_pathogenic | 0.9359 | pathogenic | -1.285 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
V/S | 0.6197 | likely_pathogenic | 0.6019 | pathogenic | -2.508 | Highly Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
V/T | 0.3535 | ambiguous | 0.3179 | benign | -2.301 | Highly Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
V/W | 0.9854 | likely_pathogenic | 0.9864 | pathogenic | -1.831 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/Y | 0.9601 | likely_pathogenic | 0.9651 | pathogenic | -1.521 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.