Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6669 | 20230;20231;20232 | chr2:178727360;178727359;178727358 | chr2:179592087;179592086;179592085 |
N2AB | 6352 | 19279;19280;19281 | chr2:178727360;178727359;178727358 | chr2:179592087;179592086;179592085 |
N2A | 5425 | 16498;16499;16500 | chr2:178727360;178727359;178727358 | chr2:179592087;179592086;179592085 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | None | None | 1.0 | D | 0.837 | 0.724 | 0.875463282793 | gnomAD-4.0.0 | 1.63511E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.50281E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9754 | likely_pathogenic | 0.9794 | pathogenic | -2.866 | Highly Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
F/C | 0.9729 | likely_pathogenic | 0.9777 | pathogenic | -1.412 | Destabilizing | 1.0 | D | 0.835 | deleterious | D | 0.556870306 | None | None | N |
F/D | 0.9956 | likely_pathogenic | 0.9965 | pathogenic | -2.313 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
F/E | 0.9954 | likely_pathogenic | 0.9963 | pathogenic | -2.218 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
F/G | 0.9935 | likely_pathogenic | 0.9946 | pathogenic | -3.215 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
F/H | 0.9858 | likely_pathogenic | 0.9878 | pathogenic | -1.448 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
F/I | 0.6717 | likely_pathogenic | 0.7002 | pathogenic | -1.77 | Destabilizing | 1.0 | D | 0.767 | deleterious | N | 0.494761818 | None | None | N |
F/K | 0.9975 | likely_pathogenic | 0.9981 | pathogenic | -1.574 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
F/L | 0.9836 | likely_pathogenic | 0.9847 | pathogenic | -1.77 | Destabilizing | 0.999 | D | 0.625 | neutral | N | 0.500236456 | None | None | N |
F/M | 0.9003 | likely_pathogenic | 0.9096 | pathogenic | -1.298 | Destabilizing | 0.999 | D | 0.77 | deleterious | None | None | None | None | N |
F/N | 0.9886 | likely_pathogenic | 0.9898 | pathogenic | -1.626 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
F/P | 0.9942 | likely_pathogenic | 0.9955 | pathogenic | -2.137 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
F/Q | 0.9953 | likely_pathogenic | 0.996 | pathogenic | -1.802 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
F/R | 0.9939 | likely_pathogenic | 0.9954 | pathogenic | -0.776 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
F/S | 0.9854 | likely_pathogenic | 0.9879 | pathogenic | -2.363 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | D | 0.530029866 | None | None | N |
F/T | 0.9803 | likely_pathogenic | 0.9833 | pathogenic | -2.18 | Highly Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
F/V | 0.7861 | likely_pathogenic | 0.8079 | pathogenic | -2.137 | Highly Destabilizing | 1.0 | D | 0.753 | deleterious | N | 0.505730184 | None | None | N |
F/W | 0.8648 | likely_pathogenic | 0.8947 | pathogenic | -0.791 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
F/Y | 0.6076 | likely_pathogenic | 0.6379 | pathogenic | -1.061 | Destabilizing | 0.998 | D | 0.599 | neutral | D | 0.530283355 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.