Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6695 | 20308;20309;20310 | chr2:178727282;178727281;178727280 | chr2:179592009;179592008;179592007 |
N2AB | 6378 | 19357;19358;19359 | chr2:178727282;178727281;178727280 | chr2:179592009;179592008;179592007 |
N2A | 5451 | 16576;16577;16578 | chr2:178727282;178727281;178727280 | chr2:179592009;179592008;179592007 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.936 | D | 0.523 | 0.504 | 0.728988515233 | gnomAD-4.0.0 | 1.59292E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86118E-06 | 0 | 0 |
P/S | rs1278595517 | -0.206 | 0.137 | D | 0.224 | 0.437 | 0.369867359543 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/S | rs1278595517 | -0.206 | 0.137 | D | 0.224 | 0.437 | 0.369867359543 | gnomAD-4.0.0 | 1.59304E-06 | None | None | None | None | I | None | 0 | 2.29022E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.5294 | ambiguous | 0.5606 | ambiguous | -0.551 | Destabilizing | 0.016 | N | 0.201 | neutral | D | 0.538578695 | None | None | I |
P/C | 0.9626 | likely_pathogenic | 0.9683 | pathogenic | -0.612 | Destabilizing | 0.992 | D | 0.456 | neutral | None | None | None | None | I |
P/D | 0.916 | likely_pathogenic | 0.9316 | pathogenic | -0.46 | Destabilizing | 0.276 | N | 0.463 | neutral | None | None | None | None | I |
P/E | 0.7841 | likely_pathogenic | 0.823 | pathogenic | -0.579 | Destabilizing | 0.377 | N | 0.473 | neutral | None | None | None | None | I |
P/F | 0.9783 | likely_pathogenic | 0.9832 | pathogenic | -0.797 | Destabilizing | 0.998 | D | 0.484 | neutral | None | None | None | None | I |
P/G | 0.8172 | likely_pathogenic | 0.8481 | pathogenic | -0.68 | Destabilizing | 0.661 | D | 0.449 | neutral | None | None | None | None | I |
P/H | 0.8012 | likely_pathogenic | 0.8458 | pathogenic | -0.279 | Destabilizing | 0.998 | D | 0.429 | neutral | None | None | None | None | I |
P/I | 0.9362 | likely_pathogenic | 0.9347 | pathogenic | -0.364 | Destabilizing | 0.985 | D | 0.485 | neutral | None | None | None | None | I |
P/K | 0.8543 | likely_pathogenic | 0.8979 | pathogenic | -0.54 | Destabilizing | 0.906 | D | 0.431 | neutral | None | None | None | None | I |
P/L | 0.7007 | likely_pathogenic | 0.7373 | pathogenic | -0.364 | Destabilizing | 0.936 | D | 0.523 | neutral | D | 0.594366083 | None | None | I |
P/M | 0.9086 | likely_pathogenic | 0.9198 | pathogenic | -0.389 | Destabilizing | 0.998 | D | 0.429 | neutral | None | None | None | None | I |
P/N | 0.8908 | likely_pathogenic | 0.9175 | pathogenic | -0.25 | Destabilizing | 0.894 | D | 0.471 | neutral | None | None | None | None | I |
P/Q | 0.6865 | likely_pathogenic | 0.7374 | pathogenic | -0.513 | Destabilizing | 0.95 | D | 0.423 | neutral | D | 0.538578695 | None | None | I |
P/R | 0.7068 | likely_pathogenic | 0.7683 | pathogenic | 0.007 | Stabilizing | 0.096 | N | 0.275 | neutral | D | 0.62321522 | None | None | I |
P/S | 0.6598 | likely_pathogenic | 0.7175 | pathogenic | -0.576 | Destabilizing | 0.137 | N | 0.224 | neutral | D | 0.534780033 | None | None | I |
P/T | 0.5875 | likely_pathogenic | 0.6133 | pathogenic | -0.599 | Destabilizing | 0.024 | N | 0.223 | neutral | D | 0.555423142 | None | None | I |
P/V | 0.8483 | likely_pathogenic | 0.8432 | pathogenic | -0.392 | Destabilizing | 0.772 | D | 0.484 | neutral | None | None | None | None | I |
P/W | 0.9805 | likely_pathogenic | 0.9843 | pathogenic | -0.877 | Destabilizing | 0.999 | D | 0.567 | neutral | None | None | None | None | I |
P/Y | 0.9683 | likely_pathogenic | 0.9765 | pathogenic | -0.586 | Destabilizing | 0.998 | D | 0.485 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.