Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6698 | 20317;20318;20319 | chr2:178727273;178727272;178727271 | chr2:179592000;179591999;179591998 |
N2AB | 6381 | 19366;19367;19368 | chr2:178727273;178727272;178727271 | chr2:179592000;179591999;179591998 |
N2A | 5454 | 16585;16586;16587 | chr2:178727273;178727272;178727271 | chr2:179592000;179591999;179591998 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | None | N | 0.137 | 0.093 | 0.176091768786 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2536 | likely_benign | 0.2646 | benign | -0.085 | Destabilizing | 0.035 | N | 0.459 | neutral | None | None | None | None | I |
R/C | 0.2259 | likely_benign | 0.2383 | benign | -0.296 | Destabilizing | 0.935 | D | 0.503 | neutral | None | None | None | None | I |
R/D | 0.4357 | ambiguous | 0.4166 | ambiguous | -0.099 | Destabilizing | 0.149 | N | 0.57 | neutral | None | None | None | None | I |
R/E | 0.2283 | likely_benign | 0.2234 | benign | -0.015 | Destabilizing | 0.035 | N | 0.477 | neutral | None | None | None | None | I |
R/F | 0.5185 | ambiguous | 0.5414 | ambiguous | -0.17 | Destabilizing | 0.791 | D | 0.531 | neutral | None | None | None | None | I |
R/G | 0.1849 | likely_benign | 0.1911 | benign | -0.316 | Destabilizing | 0.117 | N | 0.544 | neutral | N | 0.466199834 | None | None | I |
R/H | 0.0858 | likely_benign | 0.0852 | benign | -0.724 | Destabilizing | 0.38 | N | 0.547 | neutral | None | None | None | None | I |
R/I | 0.2544 | likely_benign | 0.2574 | benign | 0.497 | Stabilizing | 0.317 | N | 0.566 | neutral | N | 0.462159451 | None | None | I |
R/K | 0.0808 | likely_benign | 0.0786 | benign | -0.233 | Destabilizing | None | N | 0.137 | neutral | N | 0.355741275 | None | None | I |
R/L | 0.2017 | likely_benign | 0.2212 | benign | 0.497 | Stabilizing | 0.149 | N | 0.549 | neutral | None | None | None | None | I |
R/M | 0.2321 | likely_benign | 0.2354 | benign | -0.013 | Destabilizing | 0.555 | D | 0.553 | neutral | None | None | None | None | I |
R/N | 0.3369 | likely_benign | 0.3321 | benign | -0.014 | Destabilizing | 0.149 | N | 0.501 | neutral | None | None | None | None | I |
R/P | 0.7249 | likely_pathogenic | 0.7152 | pathogenic | 0.325 | Stabilizing | 0.262 | N | 0.601 | neutral | None | None | None | None | I |
R/Q | 0.0884 | likely_benign | 0.0879 | benign | -0.092 | Destabilizing | 0.001 | N | 0.258 | neutral | None | None | None | None | I |
R/S | 0.2632 | likely_benign | 0.2622 | benign | -0.404 | Destabilizing | 0.027 | N | 0.497 | neutral | N | 0.40301236 | None | None | I |
R/T | 0.1312 | likely_benign | 0.1316 | benign | -0.173 | Destabilizing | 0.002 | N | 0.276 | neutral | N | 0.411575915 | None | None | I |
R/V | 0.295 | likely_benign | 0.3022 | benign | 0.325 | Stabilizing | 0.149 | N | 0.565 | neutral | None | None | None | None | I |
R/W | 0.1911 | likely_benign | 0.1983 | benign | -0.146 | Destabilizing | 0.935 | D | 0.513 | neutral | None | None | None | None | I |
R/Y | 0.3724 | ambiguous | 0.385 | ambiguous | 0.233 | Stabilizing | 0.555 | D | 0.559 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.