Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6714 | 20365;20366;20367 | chr2:178727225;178727224;178727223 | chr2:179591952;179591951;179591950 |
N2AB | 6397 | 19414;19415;19416 | chr2:178727225;178727224;178727223 | chr2:179591952;179591951;179591950 |
N2A | 5470 | 16633;16634;16635 | chr2:178727225;178727224;178727223 | chr2:179591952;179591951;179591950 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs774722320 | -1.631 | 0.003 | N | 0.423 | 0.44 | 0.493695379898 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
Y/C | rs774722320 | -1.631 | 0.003 | N | 0.423 | 0.44 | 0.493695379898 | gnomAD-4.0.0 | 2.05329E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.6991E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.6567 | likely_pathogenic | 0.7045 | pathogenic | -2.955 | Highly Destabilizing | 0.388 | N | 0.495 | neutral | None | None | None | None | N |
Y/C | 0.1997 | likely_benign | 0.2054 | benign | -1.944 | Destabilizing | 0.003 | N | 0.423 | neutral | N | 0.514107068 | None | None | N |
Y/D | 0.6219 | likely_pathogenic | 0.716 | pathogenic | -2.667 | Highly Destabilizing | 0.912 | D | 0.601 | neutral | D | 0.537491242 | None | None | N |
Y/E | 0.7592 | likely_pathogenic | 0.8177 | pathogenic | -2.514 | Highly Destabilizing | 0.818 | D | 0.559 | neutral | None | None | None | None | N |
Y/F | 0.1083 | likely_benign | 0.0965 | benign | -1.247 | Destabilizing | 0.001 | N | 0.171 | neutral | N | 0.475358035 | None | None | N |
Y/G | 0.6226 | likely_pathogenic | 0.7147 | pathogenic | -3.363 | Highly Destabilizing | 0.818 | D | 0.577 | neutral | None | None | None | None | N |
Y/H | 0.2219 | likely_benign | 0.2515 | benign | -1.925 | Destabilizing | 0.912 | D | 0.527 | neutral | N | 0.51239627 | None | None | N |
Y/I | 0.3568 | ambiguous | 0.382 | ambiguous | -1.641 | Destabilizing | 0.241 | N | 0.497 | neutral | None | None | None | None | N |
Y/K | 0.7476 | likely_pathogenic | 0.8262 | pathogenic | -2.08 | Highly Destabilizing | 0.818 | D | 0.557 | neutral | None | None | None | None | N |
Y/L | 0.395 | ambiguous | 0.4303 | ambiguous | -1.641 | Destabilizing | 0.002 | N | 0.289 | neutral | None | None | None | None | N |
Y/M | 0.5709 | likely_pathogenic | 0.5963 | pathogenic | -1.376 | Destabilizing | 0.69 | D | 0.538 | neutral | None | None | None | None | N |
Y/N | 0.2868 | likely_benign | 0.3547 | ambiguous | -2.66 | Highly Destabilizing | 0.912 | D | 0.575 | neutral | N | 0.507777192 | None | None | N |
Y/P | 0.9476 | likely_pathogenic | 0.9686 | pathogenic | -2.087 | Highly Destabilizing | 0.932 | D | 0.599 | neutral | None | None | None | None | N |
Y/Q | 0.5665 | likely_pathogenic | 0.6475 | pathogenic | -2.48 | Highly Destabilizing | 0.932 | D | 0.555 | neutral | None | None | None | None | N |
Y/R | 0.5937 | likely_pathogenic | 0.6894 | pathogenic | -1.722 | Destabilizing | 0.818 | D | 0.575 | neutral | None | None | None | None | N |
Y/S | 0.4021 | ambiguous | 0.4719 | ambiguous | -3.128 | Highly Destabilizing | 0.773 | D | 0.538 | neutral | N | 0.491874983 | None | None | N |
Y/T | 0.5328 | ambiguous | 0.6068 | pathogenic | -2.854 | Highly Destabilizing | 0.818 | D | 0.539 | neutral | None | None | None | None | N |
Y/V | 0.3228 | likely_benign | 0.3382 | benign | -2.087 | Highly Destabilizing | 0.241 | N | 0.488 | neutral | None | None | None | None | N |
Y/W | 0.46 | ambiguous | 0.4795 | ambiguous | -0.735 | Destabilizing | 0.944 | D | 0.513 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.