Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6727 | 20404;20405;20406 | chr2:178727186;178727185;178727184 | chr2:179591913;179591912;179591911 |
N2AB | 6410 | 19453;19454;19455 | chr2:178727186;178727185;178727184 | chr2:179591913;179591912;179591911 |
N2A | 5483 | 16672;16673;16674 | chr2:178727186;178727185;178727184 | chr2:179591913;179591912;179591911 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/L | None | None | None | N | 0.261 | 0.226 | 0.437100570223 | gnomAD-4.0.0 | 1.36888E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79943E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.7827 | likely_pathogenic | 0.8483 | pathogenic | -2.317 | Highly Destabilizing | 0.003 | N | 0.441 | neutral | None | None | None | None | N |
M/C | 0.9236 | likely_pathogenic | 0.9311 | pathogenic | -2.591 | Highly Destabilizing | 0.995 | D | 0.729 | prob.delet. | None | None | None | None | N |
M/D | 0.9918 | likely_pathogenic | 0.9957 | pathogenic | -2.114 | Highly Destabilizing | 0.985 | D | 0.765 | deleterious | None | None | None | None | N |
M/E | 0.937 | likely_pathogenic | 0.9653 | pathogenic | -1.842 | Destabilizing | 0.963 | D | 0.703 | prob.neutral | None | None | None | None | N |
M/F | 0.411 | ambiguous | 0.4298 | ambiguous | -0.781 | Destabilizing | 0.137 | N | 0.567 | neutral | None | None | None | None | N |
M/G | 0.9299 | likely_pathogenic | 0.9528 | pathogenic | -2.855 | Highly Destabilizing | 0.772 | D | 0.715 | prob.delet. | None | None | None | None | N |
M/H | 0.9396 | likely_pathogenic | 0.9666 | pathogenic | -2.562 | Highly Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
M/I | 0.3699 | ambiguous | 0.4166 | ambiguous | -0.754 | Destabilizing | 0.001 | N | 0.267 | neutral | N | 0.360455583 | None | None | N |
M/K | 0.7852 | likely_pathogenic | 0.8817 | pathogenic | -1.431 | Destabilizing | 0.967 | D | 0.625 | neutral | D | 0.526786933 | None | None | N |
M/L | 0.1461 | likely_benign | 0.1678 | benign | -0.754 | Destabilizing | None | N | 0.261 | neutral | N | 0.423483633 | None | None | N |
M/N | 0.9446 | likely_pathogenic | 0.9665 | pathogenic | -1.933 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
M/P | 0.99 | likely_pathogenic | 0.995 | pathogenic | -1.258 | Destabilizing | 0.985 | D | 0.751 | deleterious | None | None | None | None | N |
M/Q | 0.7933 | likely_pathogenic | 0.8614 | pathogenic | -1.524 | Destabilizing | 0.996 | D | 0.637 | neutral | None | None | None | None | N |
M/R | 0.8043 | likely_pathogenic | 0.8914 | pathogenic | -1.679 | Destabilizing | 0.985 | D | 0.661 | neutral | N | 0.495367248 | None | None | N |
M/S | 0.9077 | likely_pathogenic | 0.9391 | pathogenic | -2.518 | Highly Destabilizing | 0.956 | D | 0.621 | neutral | None | None | None | None | N |
M/T | 0.7706 | likely_pathogenic | 0.8498 | pathogenic | -2.096 | Highly Destabilizing | 0.907 | D | 0.613 | neutral | N | 0.506216575 | None | None | N |
M/V | 0.179 | likely_benign | 0.2078 | benign | -1.258 | Destabilizing | 0.035 | N | 0.365 | neutral | N | 0.430198961 | None | None | N |
M/W | 0.8335 | likely_pathogenic | 0.8822 | pathogenic | -1.126 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
M/Y | 0.8264 | likely_pathogenic | 0.8726 | pathogenic | -1.117 | Destabilizing | 0.992 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.