Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6735 | 20428;20429;20430 | chr2:178727162;178727161;178727160 | chr2:179591889;179591888;179591887 |
N2AB | 6418 | 19477;19478;19479 | chr2:178727162;178727161;178727160 | chr2:179591889;179591888;179591887 |
N2A | 5491 | 16696;16697;16698 | chr2:178727162;178727161;178727160 | chr2:179591889;179591888;179591887 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.002 | N | 0.159 | 0.159 | 0.146414634003 | gnomAD-4.0.0 | 1.59942E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03656E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1136 | likely_benign | 0.107 | benign | -0.822 | Destabilizing | 0.008 | N | 0.463 | neutral | None | None | None | None | N |
S/C | 0.2741 | likely_benign | 0.2829 | benign | -0.585 | Destabilizing | 0.919 | D | 0.507 | neutral | D | 0.535035706 | None | None | N |
S/D | 0.5961 | likely_pathogenic | 0.6203 | pathogenic | -0.018 | Destabilizing | 0.002 | N | 0.315 | neutral | None | None | None | None | N |
S/E | 0.7058 | likely_pathogenic | 0.7229 | pathogenic | -0.059 | Destabilizing | 0.282 | N | 0.445 | neutral | None | None | None | None | N |
S/F | 0.5663 | likely_pathogenic | 0.5669 | pathogenic | -1.197 | Destabilizing | 0.937 | D | 0.575 | neutral | None | None | None | None | N |
S/G | 0.1097 | likely_benign | 0.1009 | benign | -1.001 | Destabilizing | 0.002 | N | 0.159 | neutral | N | 0.489330542 | None | None | N |
S/H | 0.6562 | likely_pathogenic | 0.6629 | pathogenic | -1.469 | Destabilizing | 0.937 | D | 0.508 | neutral | None | None | None | None | N |
S/I | 0.4703 | ambiguous | 0.4729 | ambiguous | -0.458 | Destabilizing | 0.735 | D | 0.582 | neutral | N | 0.511816116 | None | None | N |
S/K | 0.8611 | likely_pathogenic | 0.8807 | pathogenic | -0.575 | Destabilizing | 0.677 | D | 0.451 | neutral | None | None | None | None | N |
S/L | 0.2313 | likely_benign | 0.2483 | benign | -0.458 | Destabilizing | 0.512 | D | 0.541 | neutral | None | None | None | None | N |
S/M | 0.3678 | ambiguous | 0.3685 | ambiguous | -0.102 | Destabilizing | 0.983 | D | 0.494 | neutral | None | None | None | None | N |
S/N | 0.2499 | likely_benign | 0.2512 | benign | -0.434 | Destabilizing | 0.001 | N | 0.331 | neutral | N | 0.498293764 | None | None | N |
S/P | 0.8703 | likely_pathogenic | 0.8786 | pathogenic | -0.549 | Destabilizing | 0.8 | D | 0.525 | neutral | None | None | None | None | N |
S/Q | 0.7205 | likely_pathogenic | 0.7247 | pathogenic | -0.702 | Destabilizing | 0.937 | D | 0.457 | neutral | None | None | None | None | N |
S/R | 0.7805 | likely_pathogenic | 0.8113 | pathogenic | -0.407 | Destabilizing | 0.847 | D | 0.53 | neutral | N | 0.508827149 | None | None | N |
S/T | 0.1052 | likely_benign | 0.1102 | benign | -0.575 | Destabilizing | None | N | 0.331 | neutral | N | 0.497485533 | None | None | N |
S/V | 0.4522 | ambiguous | 0.4492 | ambiguous | -0.549 | Destabilizing | 0.282 | N | 0.559 | neutral | None | None | None | None | N |
S/W | 0.721 | likely_pathogenic | 0.7223 | pathogenic | -1.091 | Destabilizing | 0.994 | D | 0.643 | neutral | None | None | None | None | N |
S/Y | 0.5155 | ambiguous | 0.505 | ambiguous | -0.847 | Destabilizing | 0.937 | D | 0.575 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.