Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6741 | 20446;20447;20448 | chr2:178727144;178727143;178727142 | chr2:179591871;179591870;179591869 |
N2AB | 6424 | 19495;19496;19497 | chr2:178727144;178727143;178727142 | chr2:179591871;179591870;179591869 |
N2A | 5497 | 16714;16715;16716 | chr2:178727144;178727143;178727142 | chr2:179591871;179591870;179591869 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1380825036 | -1.96 | 0.999 | N | 0.718 | 0.341 | 0.589461000006 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14811E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/G | rs1380825036 | -1.96 | 0.999 | N | 0.718 | 0.341 | 0.589461000006 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs1380825036 | -1.96 | 0.999 | N | 0.718 | 0.341 | 0.589461000006 | gnomAD-4.0.0 | 6.5735E-06 | None | None | None | None | N | None | 2.41243E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4094 | ambiguous | 0.4002 | ambiguous | -1.1 | Destabilizing | 0.975 | D | 0.628 | neutral | N | 0.496163716 | None | None | N |
E/C | 0.9707 | likely_pathogenic | 0.9647 | pathogenic | -0.602 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
E/D | 0.455 | ambiguous | 0.4399 | ambiguous | -1.391 | Destabilizing | 0.912 | D | 0.557 | neutral | N | 0.506140896 | None | None | N |
E/F | 0.9092 | likely_pathogenic | 0.9029 | pathogenic | -0.739 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
E/G | 0.6192 | likely_pathogenic | 0.6074 | pathogenic | -1.49 | Destabilizing | 0.999 | D | 0.718 | prob.delet. | N | 0.506647875 | None | None | N |
E/H | 0.6768 | likely_pathogenic | 0.6703 | pathogenic | -1.0 | Destabilizing | 1.0 | D | 0.626 | neutral | None | None | None | None | N |
E/I | 0.4916 | ambiguous | 0.4814 | ambiguous | -0.017 | Destabilizing | 0.988 | D | 0.744 | deleterious | None | None | None | None | N |
E/K | 0.1978 | likely_benign | 0.214 | benign | -0.781 | Destabilizing | 0.496 | N | 0.418 | neutral | N | 0.498058749 | None | None | N |
E/L | 0.6387 | likely_pathogenic | 0.6322 | pathogenic | -0.017 | Destabilizing | 0.958 | D | 0.712 | prob.delet. | None | None | None | None | N |
E/M | 0.6176 | likely_pathogenic | 0.6164 | pathogenic | 0.568 | Stabilizing | 0.995 | D | 0.763 | deleterious | None | None | None | None | N |
E/N | 0.6235 | likely_pathogenic | 0.6173 | pathogenic | -1.214 | Destabilizing | 0.993 | D | 0.591 | neutral | None | None | None | None | N |
E/P | 0.9966 | likely_pathogenic | 0.9963 | pathogenic | -0.358 | Destabilizing | 0.993 | D | 0.736 | prob.delet. | None | None | None | None | N |
E/Q | 0.1987 | likely_benign | 0.2031 | benign | -1.063 | Destabilizing | 0.995 | D | 0.594 | neutral | N | 0.498405466 | None | None | N |
E/R | 0.3932 | ambiguous | 0.3978 | ambiguous | -0.615 | Destabilizing | 0.994 | D | 0.595 | neutral | None | None | None | None | N |
E/S | 0.4874 | ambiguous | 0.4762 | ambiguous | -1.662 | Destabilizing | 0.981 | D | 0.575 | neutral | None | None | None | None | N |
E/T | 0.4445 | ambiguous | 0.426 | ambiguous | -1.316 | Destabilizing | 0.986 | D | 0.662 | neutral | None | None | None | None | N |
E/V | 0.3224 | likely_benign | 0.3049 | benign | -0.358 | Destabilizing | 0.431 | N | 0.567 | neutral | N | 0.488689904 | None | None | N |
E/W | 0.9764 | likely_pathogenic | 0.9753 | pathogenic | -0.557 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
E/Y | 0.8657 | likely_pathogenic | 0.8562 | pathogenic | -0.465 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.