Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6754 | 20485;20486;20487 | chr2:178727105;178727104;178727103 | chr2:179591832;179591831;179591830 |
N2AB | 6437 | 19534;19535;19536 | chr2:178727105;178727104;178727103 | chr2:179591832;179591831;179591830 |
N2A | 5510 | 16753;16754;16755 | chr2:178727105;178727104;178727103 | chr2:179591832;179591831;179591830 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs397517494 | None | 0.959 | N | 0.451 | 0.221 | 0.333154297509 | gnomAD-4.0.0 | 4.91921E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.42164E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2594 | likely_benign | 0.3958 | ambiguous | -0.467 | Destabilizing | 0.079 | N | 0.191 | neutral | None | None | None | None | N |
K/C | 0.7993 | likely_pathogenic | 0.8762 | pathogenic | -0.518 | Destabilizing | 0.999 | D | 0.575 | neutral | None | None | None | None | N |
K/D | 0.5488 | ambiguous | 0.7193 | pathogenic | -0.038 | Destabilizing | 0.969 | D | 0.599 | neutral | None | None | None | None | N |
K/E | 0.1571 | likely_benign | 0.2754 | benign | 0.007 | Stabilizing | 0.959 | D | 0.451 | neutral | N | 0.44437898 | None | None | N |
K/F | 0.8149 | likely_pathogenic | 0.9049 | pathogenic | -0.607 | Destabilizing | 0.982 | D | 0.605 | neutral | None | None | None | None | N |
K/G | 0.4647 | ambiguous | 0.6338 | pathogenic | -0.742 | Destabilizing | 0.884 | D | 0.53 | neutral | None | None | None | None | N |
K/H | 0.3159 | likely_benign | 0.4155 | ambiguous | -1.208 | Destabilizing | 0.999 | D | 0.578 | neutral | None | None | None | None | N |
K/I | 0.42 | ambiguous | 0.5763 | pathogenic | 0.203 | Stabilizing | 0.884 | D | 0.609 | neutral | None | None | None | None | N |
K/L | 0.4097 | ambiguous | 0.5583 | ambiguous | 0.203 | Stabilizing | 0.046 | N | 0.274 | neutral | None | None | None | None | N |
K/M | 0.2577 | likely_benign | 0.3762 | ambiguous | 0.309 | Stabilizing | 0.976 | D | 0.595 | neutral | N | 0.507990528 | None | None | N |
K/N | 0.3707 | ambiguous | 0.5381 | ambiguous | -0.123 | Destabilizing | 0.959 | D | 0.539 | neutral | N | 0.474819317 | None | None | N |
K/P | 0.7236 | likely_pathogenic | 0.8459 | pathogenic | 0.009 | Stabilizing | 0.991 | D | 0.601 | neutral | None | None | None | None | N |
K/Q | 0.1347 | likely_benign | 0.1922 | benign | -0.38 | Destabilizing | 0.996 | D | 0.565 | neutral | N | 0.453097251 | None | None | N |
K/R | 0.0809 | likely_benign | 0.088 | benign | -0.282 | Destabilizing | 0.959 | D | 0.46 | neutral | N | 0.434858207 | None | None | N |
K/S | 0.3333 | likely_benign | 0.4863 | ambiguous | -0.801 | Destabilizing | 0.759 | D | 0.475 | neutral | None | None | None | None | N |
K/T | 0.1406 | likely_benign | 0.2178 | benign | -0.576 | Destabilizing | 0.061 | N | 0.197 | neutral | N | 0.43553021 | None | None | N |
K/V | 0.3304 | likely_benign | 0.4582 | ambiguous | 0.009 | Stabilizing | 0.759 | D | 0.502 | neutral | None | None | None | None | N |
K/W | 0.8061 | likely_pathogenic | 0.8901 | pathogenic | -0.467 | Destabilizing | 0.999 | D | 0.59 | neutral | None | None | None | None | N |
K/Y | 0.6629 | likely_pathogenic | 0.7971 | pathogenic | -0.109 | Destabilizing | 0.997 | D | 0.596 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.