Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6771 | 20536;20537;20538 | chr2:178726011;178726010;178726009 | chr2:179590738;179590737;179590736 |
N2AB | 6454 | 19585;19586;19587 | chr2:178726011;178726010;178726009 | chr2:179590738;179590737;179590736 |
N2A | 5527 | 16804;16805;16806 | chr2:178726011;178726010;178726009 | chr2:179590738;179590737;179590736 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs750614578 | 0.023 | 0.385 | N | 0.472 | 0.257 | 0.272639205421 | gnomAD-2.1.1 | 8.75E-06 | None | None | None | None | N | None | 0 | 0 | None | 1.11185E-04 | 0 | None | 0 | None | 0 | 9.46E-06 | 0 |
E/Q | rs750614578 | 0.023 | 0.385 | N | 0.472 | 0.257 | 0.272639205421 | gnomAD-4.0.0 | 2.81713E-06 | None | None | None | None | N | None | 0 | 0 | None | 1.20715E-04 | 0 | None | 0 | 0 | 9.18771E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1832 | likely_benign | 0.1729 | benign | -0.525 | Destabilizing | 0.321 | N | 0.552 | neutral | N | 0.488303357 | None | None | N |
E/C | 0.8747 | likely_pathogenic | 0.876 | pathogenic | -0.242 | Destabilizing | 0.981 | D | 0.728 | prob.delet. | None | None | None | None | N |
E/D | 0.1206 | likely_benign | 0.1044 | benign | -0.549 | Destabilizing | None | N | 0.164 | neutral | D | 0.535003771 | None | None | N |
E/F | 0.7811 | likely_pathogenic | 0.7605 | pathogenic | -0.211 | Destabilizing | 0.962 | D | 0.651 | neutral | None | None | None | None | N |
E/G | 0.1772 | likely_benign | 0.1751 | benign | -0.77 | Destabilizing | 0.611 | D | 0.545 | neutral | D | 0.530136669 | None | None | N |
E/H | 0.4943 | ambiguous | 0.4684 | ambiguous | -0.034 | Destabilizing | 0.947 | D | 0.491 | neutral | None | None | None | None | N |
E/I | 0.4865 | ambiguous | 0.4473 | ambiguous | 0.103 | Stabilizing | 0.794 | D | 0.639 | neutral | None | None | None | None | N |
E/K | 0.2202 | likely_benign | 0.2091 | benign | 0.079 | Stabilizing | 0.466 | N | 0.531 | neutral | D | 0.524997421 | None | None | N |
E/L | 0.4744 | ambiguous | 0.4364 | ambiguous | 0.103 | Stabilizing | 0.794 | D | 0.625 | neutral | None | None | None | None | N |
E/M | 0.5684 | likely_pathogenic | 0.5312 | ambiguous | 0.199 | Stabilizing | 0.888 | D | 0.619 | neutral | None | None | None | None | N |
E/N | 0.2445 | likely_benign | 0.2152 | benign | -0.349 | Destabilizing | 0.112 | N | 0.491 | neutral | None | None | None | None | N |
E/P | 0.5025 | ambiguous | 0.4965 | ambiguous | -0.086 | Destabilizing | 0.365 | N | 0.539 | neutral | None | None | None | None | N |
E/Q | 0.1752 | likely_benign | 0.1588 | benign | -0.292 | Destabilizing | 0.385 | N | 0.472 | neutral | N | 0.513647064 | None | None | N |
E/R | 0.3655 | ambiguous | 0.3503 | ambiguous | 0.382 | Stabilizing | 0.803 | D | 0.497 | neutral | None | None | None | None | N |
E/S | 0.2109 | likely_benign | 0.1939 | benign | -0.525 | Destabilizing | 0.238 | N | 0.505 | neutral | None | None | None | None | N |
E/T | 0.2573 | likely_benign | 0.2314 | benign | -0.325 | Destabilizing | 0.463 | N | 0.529 | neutral | None | None | None | None | N |
E/V | 0.2773 | likely_benign | 0.256 | benign | -0.086 | Destabilizing | 0.674 | D | 0.558 | neutral | N | 0.518108734 | None | None | N |
E/W | 0.9061 | likely_pathogenic | 0.9008 | pathogenic | 0.006 | Stabilizing | 0.996 | D | 0.741 | deleterious | None | None | None | None | N |
E/Y | 0.6188 | likely_pathogenic | 0.5997 | pathogenic | 0.043 | Stabilizing | 0.985 | D | 0.625 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.