Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC677320542;20543;20544 chr2:178726005;178726004;178726003chr2:179590732;179590731;179590730
N2AB645619591;19592;19593 chr2:178726005;178726004;178726003chr2:179590732;179590731;179590730
N2A552916810;16811;16812 chr2:178726005;178726004;178726003chr2:179590732;179590731;179590730
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Ig-52
  • Domain position: 13
  • Structural Position: 18
  • Q(SASA): 0.6468
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs189557659 -0.62 0.925 N 0.457 0.299 None gnomAD-3.1.2 1.97E-05 None None None None I None 0 0 0 0 5.80271E-04 None 0 0 0 0 0
L/F rs189557659 -0.62 0.925 N 0.457 0.299 None 1000 genomes 1.99681E-04 None None None None I None 0 0 None None 1E-03 0 None None None 0 None
L/F rs189557659 -0.62 0.925 N 0.457 0.299 None gnomAD-4.0.0 3.28221E-05 None None None None I None 0 0 None 0 1.16449E-03 None 0 0 0 0 1.63372E-05
L/P rs1327286420 -0.657 0.99 D 0.641 0.557 0.789426192391 gnomAD-4.0.0 1.64061E-06 None None None None I None 0 0 None 0 2.82917E-05 None 0 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.1933 likely_benign 0.1719 benign -0.946 Destabilizing 0.743 D 0.495 neutral None None None None I
L/C 0.547 ambiguous 0.5186 ambiguous -0.689 Destabilizing 0.998 D 0.515 neutral None None None None I
L/D 0.5826 likely_pathogenic 0.5636 ambiguous -0.255 Destabilizing 0.992 D 0.64 neutral None None None None I
L/E 0.2743 likely_benign 0.2731 benign -0.31 Destabilizing 0.968 D 0.645 neutral None None None None I
L/F 0.1339 likely_benign 0.1131 benign -0.719 Destabilizing 0.925 D 0.457 neutral N 0.492391507 None None I
L/G 0.3945 ambiguous 0.3675 ambiguous -1.179 Destabilizing 0.976 D 0.639 neutral None None None None I
L/H 0.241 likely_benign 0.2165 benign -0.379 Destabilizing 0.993 D 0.673 neutral N 0.507431116 None None I
L/I 0.095 likely_benign 0.0829 benign -0.429 Destabilizing 0.002 N 0.218 neutral N 0.516319223 None None I
L/K 0.227 likely_benign 0.2224 benign -0.572 Destabilizing 0.547 D 0.615 neutral None None None None I
L/M 0.1131 likely_benign 0.1016 benign -0.424 Destabilizing 0.831 D 0.444 neutral None None None None I
L/N 0.2985 likely_benign 0.2642 benign -0.352 Destabilizing 0.992 D 0.642 neutral None None None None I
L/P 0.2704 likely_benign 0.2623 benign -0.567 Destabilizing 0.99 D 0.641 neutral D 0.532019394 None None I
L/Q 0.1181 likely_benign 0.1102 benign -0.547 Destabilizing 0.981 D 0.611 neutral None None None None I
L/R 0.1853 likely_benign 0.1886 benign -0.006 Destabilizing 0.974 D 0.614 neutral N 0.484302805 None None I
L/S 0.1819 likely_benign 0.1641 benign -0.897 Destabilizing 0.976 D 0.578 neutral None None None None I
L/T 0.1683 likely_benign 0.1514 benign -0.836 Destabilizing 0.634 D 0.497 neutral None None None None I
L/V 0.0883 likely_benign 0.0808 benign -0.567 Destabilizing None N 0.221 neutral N 0.466757194 None None I
L/W 0.2515 likely_benign 0.248 benign -0.739 Destabilizing 0.999 D 0.679 prob.neutral None None None None I
L/Y 0.3513 ambiguous 0.3197 benign -0.507 Destabilizing 0.854 D 0.474 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.