Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6788 | 20587;20588;20589 | chr2:178725960;178725959;178725958 | chr2:179590687;179590686;179590685 |
N2AB | 6471 | 19636;19637;19638 | chr2:178725960;178725959;178725958 | chr2:179590687;179590686;179590685 |
N2A | 5544 | 16855;16856;16857 | chr2:178725960;178725959;178725958 | chr2:179590687;179590686;179590685 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.919 | D | 0.62 | 0.59 | 0.863795767011 | gnomAD-4.0.0 | 6.84992E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00182E-07 | 0 | 0 |
P/T | rs2154304599 | None | 0.414 | D | 0.463 | 0.553 | 0.604527667468 | gnomAD-4.0.0 | 3.42457E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.50061E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2111 | likely_benign | 0.1492 | benign | -0.996 | Destabilizing | 0.001 | N | 0.251 | neutral | D | 0.563998926 | None | None | I |
P/C | 0.9122 | likely_pathogenic | 0.8922 | pathogenic | -0.7 | Destabilizing | 0.99 | D | 0.651 | neutral | None | None | None | None | I |
P/D | 0.9407 | likely_pathogenic | 0.9169 | pathogenic | -0.709 | Destabilizing | 0.511 | D | 0.505 | neutral | None | None | None | None | I |
P/E | 0.7877 | likely_pathogenic | 0.6876 | pathogenic | -0.713 | Destabilizing | 0.321 | N | 0.491 | neutral | None | None | None | None | I |
P/F | 0.9002 | likely_pathogenic | 0.8467 | pathogenic | -0.779 | Destabilizing | 0.997 | D | 0.668 | neutral | None | None | None | None | I |
P/G | 0.6921 | likely_pathogenic | 0.7362 | pathogenic | -1.252 | Destabilizing | 0.604 | D | 0.483 | neutral | None | None | None | None | I |
P/H | 0.7175 | likely_pathogenic | 0.6125 | pathogenic | -0.607 | Destabilizing | 0.998 | D | 0.581 | neutral | None | None | None | None | I |
P/I | 0.7861 | likely_pathogenic | 0.6627 | pathogenic | -0.406 | Destabilizing | 0.981 | D | 0.661 | neutral | None | None | None | None | I |
P/K | 0.8654 | likely_pathogenic | 0.7664 | pathogenic | -0.772 | Destabilizing | 0.938 | D | 0.487 | neutral | None | None | None | None | I |
P/L | 0.4439 | ambiguous | 0.3194 | benign | -0.406 | Destabilizing | 0.919 | D | 0.62 | neutral | D | 0.6175986 | None | None | I |
P/M | 0.7621 | likely_pathogenic | 0.6555 | pathogenic | -0.537 | Destabilizing | 0.998 | D | 0.587 | neutral | None | None | None | None | I |
P/N | 0.8806 | likely_pathogenic | 0.8332 | pathogenic | -0.639 | Destabilizing | 0.868 | D | 0.593 | neutral | None | None | None | None | I |
P/Q | 0.623 | likely_pathogenic | 0.4549 | ambiguous | -0.766 | Destabilizing | 0.968 | D | 0.511 | neutral | D | 0.601982848 | None | None | I |
P/R | 0.7398 | likely_pathogenic | 0.6038 | pathogenic | -0.314 | Destabilizing | 0.988 | D | 0.593 | neutral | D | 0.624734984 | None | None | I |
P/S | 0.4145 | ambiguous | 0.3266 | benign | -1.084 | Destabilizing | 0.11 | N | 0.27 | neutral | D | 0.575839323 | None | None | I |
P/T | 0.4577 | ambiguous | 0.3673 | ambiguous | -0.974 | Destabilizing | 0.414 | N | 0.463 | neutral | D | 0.598995068 | None | None | I |
P/V | 0.6418 | likely_pathogenic | 0.503 | ambiguous | -0.569 | Destabilizing | 0.569 | D | 0.542 | neutral | None | None | None | None | I |
P/W | 0.9586 | likely_pathogenic | 0.945 | pathogenic | -0.927 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | I |
P/Y | 0.883 | likely_pathogenic | 0.8337 | pathogenic | -0.617 | Destabilizing | 0.997 | D | 0.668 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.