Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6790 | 20593;20594;20595 | chr2:178725954;178725953;178725952 | chr2:179590681;179590680;179590679 |
N2AB | 6473 | 19642;19643;19644 | chr2:178725954;178725953;178725952 | chr2:179590681;179590680;179590679 |
N2A | 5546 | 16861;16862;16863 | chr2:178725954;178725953;178725952 | chr2:179590681;179590680;179590679 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.999 | N | 0.555 | 0.264 | 0.284539287134 | gnomAD-4.0.0 | 4.78245E-06 | None | None | None | None | I | None | 0 | 6.87758E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9559 | likely_pathogenic | 0.9308 | pathogenic | -3.107 | Highly Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | I |
F/C | 0.9164 | likely_pathogenic | 0.8805 | pathogenic | -1.724 | Destabilizing | 1.0 | D | 0.74 | deleterious | N | 0.498961646 | None | None | I |
F/D | 0.9977 | likely_pathogenic | 0.9965 | pathogenic | -3.016 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
F/E | 0.9973 | likely_pathogenic | 0.996 | pathogenic | -2.861 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
F/G | 0.9911 | likely_pathogenic | 0.9878 | pathogenic | -3.498 | Highly Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
F/H | 0.974 | likely_pathogenic | 0.9655 | pathogenic | -1.782 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | I |
F/I | 0.8126 | likely_pathogenic | 0.6957 | pathogenic | -1.842 | Destabilizing | 1.0 | D | 0.81 | deleterious | N | 0.49965626 | None | None | I |
F/K | 0.997 | likely_pathogenic | 0.9958 | pathogenic | -2.023 | Highly Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | I |
F/L | 0.975 | likely_pathogenic | 0.9665 | pathogenic | -1.842 | Destabilizing | 0.999 | D | 0.555 | neutral | N | 0.509427749 | None | None | I |
F/M | 0.9134 | likely_pathogenic | 0.873 | pathogenic | -1.43 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | I |
F/N | 0.9882 | likely_pathogenic | 0.9837 | pathogenic | -2.273 | Highly Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | I |
F/P | 0.9898 | likely_pathogenic | 0.9889 | pathogenic | -2.272 | Highly Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
F/Q | 0.993 | likely_pathogenic | 0.99 | pathogenic | -2.355 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
F/R | 0.9897 | likely_pathogenic | 0.9859 | pathogenic | -1.316 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
F/S | 0.9585 | likely_pathogenic | 0.9423 | pathogenic | -2.955 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | N | 0.497925463 | None | None | I |
F/T | 0.9744 | likely_pathogenic | 0.9591 | pathogenic | -2.707 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
F/V | 0.7634 | likely_pathogenic | 0.6517 | pathogenic | -2.272 | Highly Destabilizing | 1.0 | D | 0.775 | deleterious | N | 0.479723705 | None | None | I |
F/W | 0.8814 | likely_pathogenic | 0.8491 | pathogenic | -0.66 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
F/Y | 0.5601 | ambiguous | 0.4964 | ambiguous | -1.04 | Destabilizing | 0.999 | D | 0.617 | neutral | N | 0.510064462 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.