Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6797 | 20614;20615;20616 | chr2:178725933;178725932;178725931 | chr2:179590660;179590659;179590658 |
N2AB | 6480 | 19663;19664;19665 | chr2:178725933;178725932;178725931 | chr2:179590660;179590659;179590658 |
N2A | 5553 | 16882;16883;16884 | chr2:178725933;178725932;178725931 | chr2:179590660;179590659;179590658 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs755018617 | -0.049 | 0.026 | D | 0.251 | 0.247 | 0.104622674875 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
D/E | rs755018617 | -0.049 | 0.026 | D | 0.251 | 0.247 | 0.104622674875 | gnomAD-4.0.0 | 3.18613E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72243E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6779 | likely_pathogenic | 0.5679 | pathogenic | -0.087 | Destabilizing | 0.19 | N | 0.385 | neutral | D | 0.575024977 | None | None | N |
D/C | 0.9402 | likely_pathogenic | 0.9214 | pathogenic | 0.009 | Stabilizing | 0.998 | D | 0.641 | neutral | None | None | None | None | N |
D/E | 0.3904 | ambiguous | 0.28 | benign | -0.208 | Destabilizing | 0.026 | N | 0.251 | neutral | D | 0.558454587 | None | None | N |
D/F | 0.9436 | likely_pathogenic | 0.8971 | pathogenic | -0.134 | Destabilizing | 0.999 | D | 0.603 | neutral | None | None | None | None | N |
D/G | 0.2833 | likely_benign | 0.2601 | benign | -0.25 | Destabilizing | 0.927 | D | 0.505 | neutral | D | 0.542421921 | None | None | N |
D/H | 0.839 | likely_pathogenic | 0.7828 | pathogenic | 0.169 | Stabilizing | 0.998 | D | 0.446 | neutral | D | 0.595626911 | None | None | N |
D/I | 0.9501 | likely_pathogenic | 0.8928 | pathogenic | 0.282 | Stabilizing | 0.998 | D | 0.602 | neutral | None | None | None | None | N |
D/K | 0.9051 | likely_pathogenic | 0.8616 | pathogenic | 0.322 | Stabilizing | 0.988 | D | 0.468 | neutral | None | None | None | None | N |
D/L | 0.8964 | likely_pathogenic | 0.8255 | pathogenic | 0.282 | Stabilizing | 0.997 | D | 0.559 | neutral | None | None | None | None | N |
D/M | 0.962 | likely_pathogenic | 0.926 | pathogenic | 0.242 | Stabilizing | 1.0 | D | 0.612 | neutral | None | None | None | None | N |
D/N | 0.2439 | likely_benign | 0.1978 | benign | 0.177 | Stabilizing | 0.195 | N | 0.213 | neutral | N | 0.510630976 | None | None | N |
D/P | 0.9924 | likely_pathogenic | 0.9859 | pathogenic | 0.18 | Stabilizing | 0.921 | D | 0.439 | neutral | None | None | None | None | N |
D/Q | 0.8326 | likely_pathogenic | 0.7559 | pathogenic | 0.186 | Stabilizing | 0.991 | D | 0.383 | neutral | None | None | None | None | N |
D/R | 0.9121 | likely_pathogenic | 0.8773 | pathogenic | 0.515 | Stabilizing | 0.997 | D | 0.55 | neutral | None | None | None | None | N |
D/S | 0.5039 | ambiguous | 0.4103 | ambiguous | 0.041 | Stabilizing | 0.921 | D | 0.449 | neutral | None | None | None | None | N |
D/T | 0.8805 | likely_pathogenic | 0.7917 | pathogenic | 0.161 | Stabilizing | 0.912 | D | 0.464 | neutral | None | None | None | None | N |
D/V | 0.8421 | likely_pathogenic | 0.7307 | pathogenic | 0.18 | Stabilizing | 0.975 | D | 0.559 | neutral | D | 0.568897615 | None | None | N |
D/W | 0.9865 | likely_pathogenic | 0.978 | pathogenic | -0.07 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
D/Y | 0.6718 | likely_pathogenic | 0.578 | pathogenic | 0.089 | Stabilizing | 0.999 | D | 0.602 | neutral | D | 0.595828715 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.