Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6803 | 20632;20633;20634 | chr2:178725915;178725914;178725913 | chr2:179590642;179590641;179590640 |
N2AB | 6486 | 19681;19682;19683 | chr2:178725915;178725914;178725913 | chr2:179590642;179590641;179590640 |
N2A | 5559 | 16900;16901;16902 | chr2:178725915;178725914;178725913 | chr2:179590642;179590641;179590640 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/I | rs2079258083 | None | 0.998 | N | 0.405 | 0.523 | 0.734682175585 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/I | rs2079258083 | None | 0.998 | N | 0.405 | 0.523 | 0.734682175585 | gnomAD-4.0.0 | 6.57618E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47033E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1296 | likely_benign | 0.1277 | benign | -0.21 | Destabilizing | 0.17 | N | 0.248 | neutral | None | None | None | None | N |
S/C | 0.304 | likely_benign | 0.3895 | ambiguous | -0.353 | Destabilizing | 0.998 | D | 0.389 | neutral | D | 0.539341347 | None | None | N |
S/D | 0.7497 | likely_pathogenic | 0.7055 | pathogenic | 0.535 | Stabilizing | 0.021 | N | 0.072 | neutral | None | None | None | None | N |
S/E | 0.8339 | likely_pathogenic | 0.8273 | pathogenic | 0.452 | Stabilizing | 0.112 | N | 0.087 | neutral | None | None | None | None | N |
S/F | 0.4224 | ambiguous | 0.4293 | ambiguous | -0.872 | Destabilizing | 0.998 | D | 0.391 | neutral | None | None | None | None | N |
S/G | 0.1241 | likely_benign | 0.1127 | benign | -0.303 | Destabilizing | 0.795 | D | 0.249 | neutral | N | 0.492572999 | None | None | N |
S/H | 0.6605 | likely_pathogenic | 0.6651 | pathogenic | -0.718 | Destabilizing | 0.994 | D | 0.377 | neutral | None | None | None | None | N |
S/I | 0.3163 | likely_benign | 0.3255 | benign | -0.102 | Destabilizing | 0.998 | D | 0.405 | neutral | N | 0.501802937 | None | None | N |
S/K | 0.9303 | likely_pathogenic | 0.9305 | pathogenic | -0.23 | Destabilizing | 0.962 | D | 0.173 | neutral | None | None | None | None | N |
S/L | 0.1793 | likely_benign | 0.1751 | benign | -0.102 | Destabilizing | 0.981 | D | 0.361 | neutral | None | None | None | None | N |
S/M | 0.3383 | likely_benign | 0.3394 | benign | -0.127 | Destabilizing | 1.0 | D | 0.372 | neutral | None | None | None | None | N |
S/N | 0.2308 | likely_benign | 0.1853 | benign | -0.093 | Destabilizing | 0.008 | N | 0.098 | neutral | N | 0.487039591 | None | None | N |
S/P | 0.1803 | likely_benign | 0.1672 | benign | -0.11 | Destabilizing | 0.009 | N | 0.134 | neutral | None | None | None | None | N |
S/Q | 0.7779 | likely_pathogenic | 0.7779 | pathogenic | -0.242 | Destabilizing | 0.962 | D | 0.277 | neutral | None | None | None | None | N |
S/R | 0.9123 | likely_pathogenic | 0.9111 | pathogenic | -0.115 | Destabilizing | 0.95 | D | 0.407 | neutral | N | 0.499143138 | None | None | N |
S/T | 0.1265 | likely_benign | 0.1176 | benign | -0.188 | Destabilizing | 0.197 | N | 0.224 | neutral | N | 0.489988878 | None | None | N |
S/V | 0.3362 | likely_benign | 0.3307 | benign | -0.11 | Destabilizing | 0.95 | D | 0.383 | neutral | None | None | None | None | N |
S/W | 0.6019 | likely_pathogenic | 0.6362 | pathogenic | -0.935 | Destabilizing | 1.0 | D | 0.491 | neutral | None | None | None | None | N |
S/Y | 0.3644 | ambiguous | 0.3817 | ambiguous | -0.604 | Destabilizing | 0.998 | D | 0.392 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.