Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6808 | 20647;20648;20649 | chr2:178725900;178725899;178725898 | chr2:179590627;179590626;179590625 |
N2AB | 6491 | 19696;19697;19698 | chr2:178725900;178725899;178725898 | chr2:179590627;179590626;179590625 |
N2A | 5564 | 16915;16916;16917 | chr2:178725900;178725899;178725898 | chr2:179590627;179590626;179590625 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 0.864 | N | 0.537 | 0.332 | 0.42069145522 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9022 | likely_pathogenic | 0.9071 | pathogenic | -0.789 | Destabilizing | 0.92 | D | 0.529 | neutral | None | None | None | None | N |
K/C | 0.947 | likely_pathogenic | 0.9563 | pathogenic | -0.873 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
K/D | 0.9664 | likely_pathogenic | 0.9648 | pathogenic | -0.393 | Destabilizing | 0.982 | D | 0.526 | neutral | None | None | None | None | N |
K/E | 0.7503 | likely_pathogenic | 0.7687 | pathogenic | -0.258 | Destabilizing | 0.927 | D | 0.525 | neutral | N | 0.512337555 | None | None | N |
K/F | 0.9606 | likely_pathogenic | 0.9678 | pathogenic | -0.483 | Destabilizing | 0.998 | D | 0.641 | neutral | None | None | None | None | N |
K/G | 0.9441 | likely_pathogenic | 0.9466 | pathogenic | -1.178 | Destabilizing | 0.149 | N | 0.282 | neutral | None | None | None | None | N |
K/H | 0.6262 | likely_pathogenic | 0.6486 | pathogenic | -1.543 | Destabilizing | 0.999 | D | 0.593 | neutral | None | None | None | None | N |
K/I | 0.7331 | likely_pathogenic | 0.781 | pathogenic | 0.233 | Stabilizing | 0.921 | D | 0.632 | neutral | None | None | None | None | N |
K/L | 0.7544 | likely_pathogenic | 0.7816 | pathogenic | 0.233 | Stabilizing | 0.77 | D | 0.513 | neutral | None | None | None | None | N |
K/M | 0.6522 | likely_pathogenic | 0.6937 | pathogenic | 0.175 | Stabilizing | 0.998 | D | 0.592 | neutral | N | 0.512790395 | None | None | N |
K/N | 0.9108 | likely_pathogenic | 0.9074 | pathogenic | -0.722 | Destabilizing | 0.977 | D | 0.497 | neutral | N | 0.48721372 | None | None | N |
K/P | 0.9927 | likely_pathogenic | 0.991 | pathogenic | -0.078 | Destabilizing | 0.997 | D | 0.579 | neutral | None | None | None | None | N |
K/Q | 0.4012 | ambiguous | 0.4119 | ambiguous | -0.786 | Destabilizing | 0.973 | D | 0.539 | neutral | N | 0.493117076 | None | None | N |
K/R | 0.1142 | likely_benign | 0.1133 | benign | -0.739 | Destabilizing | 0.195 | N | 0.213 | neutral | N | 0.486305747 | None | None | N |
K/S | 0.9051 | likely_pathogenic | 0.9114 | pathogenic | -1.425 | Destabilizing | 0.686 | D | 0.227 | neutral | None | None | None | None | N |
K/T | 0.6641 | likely_pathogenic | 0.6939 | pathogenic | -1.069 | Destabilizing | 0.864 | D | 0.537 | neutral | N | 0.496677456 | None | None | N |
K/V | 0.7253 | likely_pathogenic | 0.7602 | pathogenic | -0.078 | Destabilizing | 0.939 | D | 0.535 | neutral | None | None | None | None | N |
K/W | 0.9377 | likely_pathogenic | 0.9512 | pathogenic | -0.344 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
K/Y | 0.8905 | likely_pathogenic | 0.9104 | pathogenic | -0.023 | Destabilizing | 0.983 | D | 0.624 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.