Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6815 | 20668;20669;20670 | chr2:178725879;178725878;178725877 | chr2:179590606;179590605;179590604 |
N2AB | 6498 | 19717;19718;19719 | chr2:178725879;178725878;178725877 | chr2:179590606;179590605;179590604 |
N2A | 5571 | 16936;16937;16938 | chr2:178725879;178725878;178725877 | chr2:179590606;179590605;179590604 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Y | None | None | 0.473 | N | 0.285 | 0.105 | 0.214338557667 | gnomAD-4.0.0 | 1.5927E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02828E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2226 | likely_benign | 0.2129 | benign | -0.571 | Destabilizing | 0.176 | N | 0.367 | neutral | None | None | None | None | N |
H/C | 0.1723 | likely_benign | 0.1975 | benign | 0.008 | Stabilizing | 0.981 | D | 0.533 | neutral | None | None | None | None | N |
H/D | 0.1776 | likely_benign | 0.1658 | benign | -0.256 | Destabilizing | 0.642 | D | 0.43 | neutral | N | 0.375847188 | None | None | N |
H/E | 0.215 | likely_benign | 0.2072 | benign | -0.221 | Destabilizing | 0.329 | N | 0.273 | neutral | None | None | None | None | N |
H/F | 0.2474 | likely_benign | 0.2345 | benign | -0.167 | Destabilizing | 0.007 | N | 0.219 | neutral | None | None | None | None | N |
H/G | 0.3016 | likely_benign | 0.2863 | benign | -0.855 | Destabilizing | 0.495 | N | 0.448 | neutral | None | None | None | None | N |
H/I | 0.1791 | likely_benign | 0.1887 | benign | 0.173 | Stabilizing | 0.007 | N | 0.358 | neutral | None | None | None | None | N |
H/K | 0.1776 | likely_benign | 0.1849 | benign | -0.502 | Destabilizing | 0.329 | N | 0.403 | neutral | None | None | None | None | N |
H/L | 0.0929 | likely_benign | 0.0955 | benign | 0.173 | Stabilizing | 0.002 | N | 0.346 | neutral | N | 0.375193827 | None | None | N |
H/M | 0.3725 | ambiguous | 0.3812 | ambiguous | 0.147 | Stabilizing | 0.893 | D | 0.544 | neutral | None | None | None | None | N |
H/N | 0.0904 | likely_benign | 0.0807 | benign | -0.291 | Destabilizing | 0.642 | D | 0.275 | neutral | N | 0.408170251 | None | None | N |
H/P | 0.4482 | ambiguous | 0.4259 | ambiguous | -0.052 | Destabilizing | 0.784 | D | 0.579 | neutral | N | 0.47231773 | None | None | N |
H/Q | 0.1156 | likely_benign | 0.1125 | benign | -0.222 | Destabilizing | 0.023 | N | 0.167 | neutral | N | 0.427910805 | None | None | N |
H/R | 0.0778 | likely_benign | 0.0796 | benign | -0.694 | Destabilizing | 0.473 | N | 0.307 | neutral | N | 0.412402634 | None | None | N |
H/S | 0.1685 | likely_benign | 0.1569 | benign | -0.421 | Destabilizing | 0.037 | N | 0.199 | neutral | None | None | None | None | N |
H/T | 0.1903 | likely_benign | 0.1918 | benign | -0.297 | Destabilizing | 0.329 | N | 0.447 | neutral | None | None | None | None | N |
H/V | 0.1626 | likely_benign | 0.1666 | benign | -0.052 | Destabilizing | 0.329 | N | 0.428 | neutral | None | None | None | None | N |
H/W | 0.3765 | ambiguous | 0.3777 | ambiguous | -0.074 | Destabilizing | 0.995 | D | 0.537 | neutral | None | None | None | None | N |
H/Y | 0.0912 | likely_benign | 0.0873 | benign | 0.299 | Stabilizing | 0.473 | N | 0.285 | neutral | N | 0.423929137 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.