Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6821 | 20686;20687;20688 | chr2:178725861;178725860;178725859 | chr2:179590588;179590587;179590586 |
N2AB | 6504 | 19735;19736;19737 | chr2:178725861;178725860;178725859 | chr2:179590588;179590587;179590586 |
N2A | 5577 | 16954;16955;16956 | chr2:178725861;178725860;178725859 | chr2:179590588;179590587;179590586 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | None | None | 1.0 | N | 0.785 | 0.32 | 0.807681222942 | gnomAD-4.0.0 | 1.5925E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86043E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4069 | ambiguous | 0.3337 | benign | -2.147 | Highly Destabilizing | 0.999 | D | 0.496 | neutral | None | None | None | None | N |
L/C | 0.6251 | likely_pathogenic | 0.5863 | pathogenic | -1.376 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
L/D | 0.866 | likely_pathogenic | 0.8142 | pathogenic | -2.008 | Highly Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
L/E | 0.6051 | likely_pathogenic | 0.5428 | ambiguous | -1.966 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
L/F | 0.1522 | likely_benign | 0.1288 | benign | -1.473 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | N | 0.476704829 | None | None | N |
L/G | 0.6825 | likely_pathogenic | 0.595 | pathogenic | -2.526 | Highly Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
L/H | 0.3194 | likely_benign | 0.2697 | benign | -1.737 | Destabilizing | 1.0 | D | 0.757 | deleterious | N | 0.505987586 | None | None | N |
L/I | 0.107 | likely_benign | 0.0981 | benign | -1.139 | Destabilizing | 0.23 | N | 0.325 | neutral | N | 0.478320982 | None | None | N |
L/K | 0.4684 | ambiguous | 0.4236 | ambiguous | -1.567 | Destabilizing | 0.998 | D | 0.768 | deleterious | None | None | None | None | N |
L/M | 0.1413 | likely_benign | 0.1235 | benign | -0.875 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
L/N | 0.5217 | ambiguous | 0.4098 | ambiguous | -1.442 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
L/P | 0.7034 | likely_pathogenic | 0.6652 | pathogenic | -1.448 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.506622304 | None | None | N |
L/Q | 0.2267 | likely_benign | 0.1909 | benign | -1.613 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
L/R | 0.3307 | likely_benign | 0.3106 | benign | -0.937 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.468679992 | None | None | N |
L/S | 0.3899 | ambiguous | 0.3149 | benign | -2.072 | Highly Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
L/T | 0.3188 | likely_benign | 0.2633 | benign | -1.916 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
L/V | 0.1336 | likely_benign | 0.1183 | benign | -1.448 | Destabilizing | 0.282 | N | 0.324 | neutral | D | 0.526632217 | None | None | N |
L/W | 0.2901 | likely_benign | 0.2795 | benign | -1.607 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
L/Y | 0.4244 | ambiguous | 0.3782 | ambiguous | -1.409 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.