Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6847 | 20764;20765;20766 | chr2:178725783;178725782;178725781 | chr2:179590510;179590509;179590508 |
N2AB | 6530 | 19813;19814;19815 | chr2:178725783;178725782;178725781 | chr2:179590510;179590509;179590508 |
N2A | 5603 | 17032;17033;17034 | chr2:178725783;178725782;178725781 | chr2:179590510;179590509;179590508 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs1162932422 | -1.055 | None | N | 0.216 | 0.066 | 0.0806252709748 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
T/S | rs1162932422 | -1.055 | None | N | 0.216 | 0.066 | 0.0806252709748 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/S | rs1162932422 | -1.055 | None | N | 0.216 | 0.066 | 0.0806252709748 | gnomAD-4.0.0 | 2.60029E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.86386E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0667 | likely_benign | 0.0615 | benign | -1.016 | Destabilizing | None | N | 0.234 | neutral | N | 0.515473861 | None | None | N |
T/C | 0.3099 | likely_benign | 0.2774 | benign | -0.781 | Destabilizing | 0.676 | D | 0.618 | neutral | None | None | None | None | N |
T/D | 0.2506 | likely_benign | 0.2406 | benign | -0.817 | Destabilizing | 0.072 | N | 0.619 | neutral | None | None | None | None | N |
T/E | 0.2048 | likely_benign | 0.196 | benign | -0.71 | Destabilizing | 0.016 | N | 0.597 | neutral | None | None | None | None | N |
T/F | 0.1285 | likely_benign | 0.1187 | benign | -0.717 | Destabilizing | 0.214 | N | 0.648 | neutral | None | None | None | None | N |
T/G | 0.1921 | likely_benign | 0.168 | benign | -1.379 | Destabilizing | None | N | 0.451 | neutral | None | None | None | None | N |
T/H | 0.1588 | likely_benign | 0.155 | benign | -1.541 | Destabilizing | 0.356 | N | 0.614 | neutral | None | None | None | None | N |
T/I | 0.0939 | likely_benign | 0.0883 | benign | -0.103 | Destabilizing | None | N | 0.477 | neutral | D | 0.528288443 | None | None | N |
T/K | 0.1423 | likely_benign | 0.1418 | benign | -0.835 | Destabilizing | 0.016 | N | 0.596 | neutral | None | None | None | None | N |
T/L | 0.0673 | likely_benign | 0.0663 | benign | -0.103 | Destabilizing | 0.006 | N | 0.575 | neutral | None | None | None | None | N |
T/M | 0.0762 | likely_benign | 0.0719 | benign | -0.01 | Destabilizing | 0.214 | N | 0.627 | neutral | None | None | None | None | N |
T/N | 0.0887 | likely_benign | 0.0848 | benign | -1.127 | Destabilizing | 0.029 | N | 0.531 | neutral | D | 0.536137135 | None | None | N |
T/P | 0.1295 | likely_benign | 0.1103 | benign | -0.374 | Destabilizing | 0.055 | N | 0.663 | neutral | N | 0.50437015 | None | None | N |
T/Q | 0.1642 | likely_benign | 0.1584 | benign | -1.091 | Destabilizing | 0.003 | N | 0.485 | neutral | None | None | None | None | N |
T/R | 0.1025 | likely_benign | 0.1124 | benign | -0.798 | Destabilizing | None | N | 0.478 | neutral | None | None | None | None | N |
T/S | 0.0825 | likely_benign | 0.0761 | benign | -1.398 | Destabilizing | None | N | 0.216 | neutral | N | 0.455385407 | None | None | N |
T/V | 0.0871 | likely_benign | 0.0806 | benign | -0.374 | Destabilizing | 0.006 | N | 0.471 | neutral | None | None | None | None | N |
T/W | 0.3924 | ambiguous | 0.3601 | ambiguous | -0.73 | Destabilizing | 0.864 | D | 0.629 | neutral | None | None | None | None | N |
T/Y | 0.1668 | likely_benign | 0.1551 | benign | -0.451 | Destabilizing | 0.356 | N | 0.645 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.