Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6856 | 20791;20792;20793 | chr2:178725638;178725637;178725636 | chr2:179590365;179590364;179590363 |
N2AB | 6539 | 19840;19841;19842 | chr2:178725638;178725637;178725636 | chr2:179590365;179590364;179590363 |
N2A | 5612 | 17059;17060;17061 | chr2:178725638;178725637;178725636 | chr2:179590365;179590364;179590363 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/V | None | None | 1.0 | D | 0.754 | 0.815 | 0.765320684573 | gnomAD-4.0.0 | 6.98616E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.12629E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9613 | likely_pathogenic | 0.9656 | pathogenic | -2.868 | Highly Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
F/C | 0.9111 | likely_pathogenic | 0.9203 | pathogenic | -1.61 | Destabilizing | 1.0 | D | 0.853 | deleterious | D | 0.552920287 | None | None | N |
F/D | 0.9925 | likely_pathogenic | 0.9955 | pathogenic | -2.903 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
F/E | 0.993 | likely_pathogenic | 0.9952 | pathogenic | -2.732 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
F/G | 0.9858 | likely_pathogenic | 0.9878 | pathogenic | -3.273 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
F/H | 0.9683 | likely_pathogenic | 0.9764 | pathogenic | -1.649 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
F/I | 0.4988 | ambiguous | 0.5537 | ambiguous | -1.56 | Destabilizing | 1.0 | D | 0.769 | deleterious | N | 0.493445145 | None | None | N |
F/K | 0.9938 | likely_pathogenic | 0.9961 | pathogenic | -1.736 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
F/L | 0.9586 | likely_pathogenic | 0.958 | pathogenic | -1.56 | Destabilizing | 0.999 | D | 0.654 | neutral | D | 0.531178273 | None | None | N |
F/M | 0.834 | likely_pathogenic | 0.8369 | pathogenic | -1.271 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
F/N | 0.973 | likely_pathogenic | 0.981 | pathogenic | -2.058 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
F/P | 0.9929 | likely_pathogenic | 0.9941 | pathogenic | -2.004 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
F/Q | 0.9896 | likely_pathogenic | 0.9921 | pathogenic | -2.103 | Highly Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
F/R | 0.9864 | likely_pathogenic | 0.991 | pathogenic | -1.148 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
F/S | 0.9635 | likely_pathogenic | 0.971 | pathogenic | -2.735 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | D | 0.552413308 | None | None | N |
F/T | 0.9572 | likely_pathogenic | 0.9659 | pathogenic | -2.464 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
F/V | 0.6337 | likely_pathogenic | 0.6776 | pathogenic | -2.004 | Highly Destabilizing | 1.0 | D | 0.754 | deleterious | D | 0.530417805 | None | None | N |
F/W | 0.8115 | likely_pathogenic | 0.8266 | pathogenic | -0.411 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
F/Y | 0.483 | ambiguous | 0.5322 | ambiguous | -0.778 | Destabilizing | 0.999 | D | 0.599 | neutral | D | 0.541310492 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.