Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6858 | 20797;20798;20799 | chr2:178725632;178725631;178725630 | chr2:179590359;179590358;179590357 |
N2AB | 6541 | 19846;19847;19848 | chr2:178725632;178725631;178725630 | chr2:179590359;179590358;179590357 |
N2A | 5614 | 17065;17066;17067 | chr2:178725632;178725631;178725630 | chr2:179590359;179590358;179590357 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs1031134000 | None | 0.602 | N | 0.395 | 0.227 | 0.4897983601 | gnomAD-4.0.0 | 6.27089E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.28847E-06 | 0 | 1.6893E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0744 | likely_benign | 0.0752 | benign | -0.583 | Destabilizing | 0.019 | N | 0.267 | neutral | N | 0.444227051 | None | None | N |
S/C | 0.1171 | likely_benign | 0.1104 | benign | -0.4 | Destabilizing | 0.851 | D | 0.359 | neutral | N | 0.504872865 | None | None | N |
S/D | 0.2353 | likely_benign | 0.2631 | benign | 0.382 | Stabilizing | 0.104 | N | 0.266 | neutral | None | None | None | None | N |
S/E | 0.2777 | likely_benign | 0.3086 | benign | 0.324 | Stabilizing | 0.055 | N | 0.292 | neutral | None | None | None | None | N |
S/F | 0.177 | likely_benign | 0.1784 | benign | -0.986 | Destabilizing | 0.602 | D | 0.395 | neutral | N | 0.504872865 | None | None | N |
S/G | 0.079 | likely_benign | 0.0769 | benign | -0.751 | Destabilizing | 0.104 | N | 0.297 | neutral | None | None | None | None | N |
S/H | 0.1805 | likely_benign | 0.1861 | benign | -1.205 | Destabilizing | 0.667 | D | 0.371 | neutral | None | None | None | None | N |
S/I | 0.1557 | likely_benign | 0.1506 | benign | -0.261 | Destabilizing | 0.124 | N | 0.363 | neutral | None | None | None | None | N |
S/K | 0.2507 | likely_benign | 0.267 | benign | -0.474 | Destabilizing | None | N | 0.105 | neutral | None | None | None | None | N |
S/L | 0.0985 | likely_benign | 0.0998 | benign | -0.261 | Destabilizing | 0.055 | N | 0.355 | neutral | None | None | None | None | N |
S/M | 0.1706 | likely_benign | 0.1621 | benign | -0.029 | Destabilizing | 0.667 | D | 0.375 | neutral | None | None | None | None | N |
S/N | 0.0846 | likely_benign | 0.0824 | benign | -0.275 | Destabilizing | 0.104 | N | 0.297 | neutral | None | None | None | None | N |
S/P | 0.3776 | ambiguous | 0.4698 | ambiguous | -0.337 | Destabilizing | 0.301 | N | 0.341 | neutral | N | 0.504699507 | None | None | N |
S/Q | 0.2429 | likely_benign | 0.2475 | benign | -0.481 | Destabilizing | 0.011 | N | 0.189 | neutral | None | None | None | None | N |
S/R | 0.2006 | likely_benign | 0.221 | benign | -0.334 | Destabilizing | 0.055 | N | 0.368 | neutral | None | None | None | None | N |
S/T | 0.0662 | likely_benign | 0.0638 | benign | -0.416 | Destabilizing | None | N | 0.11 | neutral | N | 0.440493313 | None | None | N |
S/V | 0.152 | likely_benign | 0.1478 | benign | -0.337 | Destabilizing | 0.055 | N | 0.372 | neutral | None | None | None | None | N |
S/W | 0.2459 | likely_benign | 0.2728 | benign | -0.929 | Destabilizing | 0.958 | D | 0.433 | neutral | None | None | None | None | N |
S/Y | 0.1314 | likely_benign | 0.1386 | benign | -0.67 | Destabilizing | 0.602 | D | 0.399 | neutral | N | 0.504699507 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.