Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6865 | 20818;20819;20820 | chr2:178725611;178725610;178725609 | chr2:179590338;179590337;179590336 |
N2AB | 6548 | 19867;19868;19869 | chr2:178725611;178725610;178725609 | chr2:179590338;179590337;179590336 |
N2A | 5621 | 17086;17087;17088 | chr2:178725611;178725610;178725609 | chr2:179590338;179590337;179590336 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.901 | N | 0.422 | 0.522 | 0.774875236417 | gnomAD-4.0.0 | 6.88996E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.18655E-05 | 0 |
V/I | rs2154304381 | None | 0.008 | D | 0.171 | 0.152 | 0.328752806141 | gnomAD-4.0.0 | 6.88996E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.03566E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1309 | likely_benign | 0.1316 | benign | -1.647 | Destabilizing | 0.014 | N | 0.142 | neutral | N | 0.489887557 | None | None | I |
V/C | 0.722 | likely_pathogenic | 0.731 | pathogenic | -1.138 | Destabilizing | 0.996 | D | 0.439 | neutral | None | None | None | None | I |
V/D | 0.6611 | likely_pathogenic | 0.7161 | pathogenic | -1.478 | Destabilizing | 0.949 | D | 0.492 | neutral | D | 0.529838828 | None | None | I |
V/E | 0.544 | ambiguous | 0.5871 | pathogenic | -1.422 | Destabilizing | 0.961 | D | 0.423 | neutral | None | None | None | None | I |
V/F | 0.2152 | likely_benign | 0.2428 | benign | -1.125 | Destabilizing | 0.901 | D | 0.422 | neutral | N | 0.510974105 | None | None | I |
V/G | 0.3038 | likely_benign | 0.3251 | benign | -2.022 | Highly Destabilizing | 0.565 | D | 0.45 | neutral | N | 0.506454654 | None | None | I |
V/H | 0.7284 | likely_pathogenic | 0.7454 | pathogenic | -1.554 | Destabilizing | 0.996 | D | 0.512 | neutral | None | None | None | None | I |
V/I | 0.0878 | likely_benign | 0.0846 | benign | -0.687 | Destabilizing | 0.008 | N | 0.171 | neutral | D | 0.525963 | None | None | I |
V/K | 0.5213 | ambiguous | 0.5588 | ambiguous | -1.273 | Destabilizing | 0.923 | D | 0.427 | neutral | None | None | None | None | I |
V/L | 0.2343 | likely_benign | 0.2271 | benign | -0.687 | Destabilizing | 0.156 | N | 0.413 | neutral | N | 0.515187159 | None | None | I |
V/M | 0.1655 | likely_benign | 0.1581 | benign | -0.616 | Destabilizing | 0.923 | D | 0.466 | neutral | None | None | None | None | I |
V/N | 0.5074 | ambiguous | 0.5274 | ambiguous | -1.168 | Destabilizing | 0.987 | D | 0.509 | neutral | None | None | None | None | I |
V/P | 0.8367 | likely_pathogenic | 0.8736 | pathogenic | -0.974 | Destabilizing | 0.961 | D | 0.456 | neutral | None | None | None | None | I |
V/Q | 0.5257 | ambiguous | 0.5547 | ambiguous | -1.267 | Destabilizing | 0.987 | D | 0.48 | neutral | None | None | None | None | I |
V/R | 0.4249 | ambiguous | 0.4715 | ambiguous | -0.86 | Destabilizing | 0.961 | D | 0.51 | neutral | None | None | None | None | I |
V/S | 0.2767 | likely_benign | 0.277 | benign | -1.767 | Destabilizing | 0.633 | D | 0.411 | neutral | None | None | None | None | I |
V/T | 0.1664 | likely_benign | 0.1517 | benign | -1.597 | Destabilizing | 0.775 | D | 0.39 | neutral | None | None | None | None | I |
V/W | 0.8767 | likely_pathogenic | 0.8924 | pathogenic | -1.377 | Destabilizing | 0.996 | D | 0.601 | neutral | None | None | None | None | I |
V/Y | 0.6643 | likely_pathogenic | 0.7007 | pathogenic | -1.059 | Destabilizing | 0.961 | D | 0.425 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.