Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6875 | 20848;20849;20850 | chr2:178725581;178725580;178725579 | chr2:179590308;179590307;179590306 |
N2AB | 6558 | 19897;19898;19899 | chr2:178725581;178725580;178725579 | chr2:179590308;179590307;179590306 |
N2A | 5631 | 17116;17117;17118 | chr2:178725581;178725580;178725579 | chr2:179590308;179590307;179590306 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs756292622 | -1.468 | 0.576 | N | 0.449 | 0.248 | 0.110078149338 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
A/T | rs756292622 | -1.468 | 0.576 | N | 0.449 | 0.248 | 0.110078149338 | gnomAD-4.0.0 | 2.05493E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80018E-06 | 1.16452E-05 | 0 |
A/V | rs199875225 | None | 0.978 | N | 0.696 | 0.277 | 0.227934060464 | gnomAD-4.0.0 | 1.59542E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86438E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5825 | likely_pathogenic | 0.5431 | ambiguous | -1.309 | Destabilizing | 0.491 | N | 0.543 | neutral | None | None | None | None | N |
A/D | 0.917 | likely_pathogenic | 0.9281 | pathogenic | -2.233 | Highly Destabilizing | 0.998 | D | 0.865 | deleterious | None | None | None | None | N |
A/E | 0.8901 | likely_pathogenic | 0.9129 | pathogenic | -2.069 | Highly Destabilizing | 0.997 | D | 0.798 | deleterious | N | 0.484129171 | None | None | N |
A/F | 0.6738 | likely_pathogenic | 0.6996 | pathogenic | -0.743 | Destabilizing | 0.999 | D | 0.882 | deleterious | None | None | None | None | N |
A/G | 0.2429 | likely_benign | 0.2501 | benign | -1.501 | Destabilizing | 0.989 | D | 0.694 | prob.neutral | N | 0.491977273 | None | None | N |
A/H | 0.9491 | likely_pathogenic | 0.9507 | pathogenic | -1.868 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
A/I | 0.4152 | ambiguous | 0.4065 | ambiguous | 0.15 | Stabilizing | 0.995 | D | 0.799 | deleterious | None | None | None | None | N |
A/K | 0.9652 | likely_pathogenic | 0.975 | pathogenic | -1.148 | Destabilizing | 0.995 | D | 0.799 | deleterious | None | None | None | None | N |
A/L | 0.3834 | ambiguous | 0.3989 | ambiguous | 0.15 | Stabilizing | 0.983 | D | 0.765 | deleterious | None | None | None | None | N |
A/M | 0.4455 | ambiguous | 0.4427 | ambiguous | -0.167 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
A/N | 0.8431 | likely_pathogenic | 0.8335 | pathogenic | -1.391 | Destabilizing | 0.998 | D | 0.863 | deleterious | None | None | None | None | N |
A/P | 0.9608 | likely_pathogenic | 0.9752 | pathogenic | -0.205 | Destabilizing | 0.999 | D | 0.803 | deleterious | N | 0.484129171 | None | None | N |
A/Q | 0.895 | likely_pathogenic | 0.9077 | pathogenic | -1.262 | Destabilizing | 0.999 | D | 0.788 | deleterious | None | None | None | None | N |
A/R | 0.9413 | likely_pathogenic | 0.956 | pathogenic | -1.183 | Destabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | N |
A/S | 0.2282 | likely_benign | 0.2004 | benign | -1.821 | Destabilizing | 0.956 | D | 0.686 | prob.neutral | N | 0.483622192 | None | None | N |
A/T | 0.1416 | likely_benign | 0.1318 | benign | -1.531 | Destabilizing | 0.576 | D | 0.449 | neutral | N | 0.467118901 | None | None | N |
A/V | 0.1635 | likely_benign | 0.1666 | benign | -0.205 | Destabilizing | 0.978 | D | 0.696 | prob.neutral | N | 0.498476384 | None | None | N |
A/W | 0.9683 | likely_pathogenic | 0.9735 | pathogenic | -1.449 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
A/Y | 0.8673 | likely_pathogenic | 0.8792 | pathogenic | -0.898 | Destabilizing | 0.999 | D | 0.884 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.