Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6881 | 20866;20867;20868 | chr2:178725563;178725562;178725561 | chr2:179590290;179590289;179590288 |
N2AB | 6564 | 19915;19916;19917 | chr2:178725563;178725562;178725561 | chr2:179590290;179590289;179590288 |
N2A | 5637 | 17134;17135;17136 | chr2:178725563;178725562;178725561 | chr2:179590290;179590289;179590288 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/L | None | None | 0.324 | N | 0.477 | 0.193 | 0.367992661779 | gnomAD-4.0.0 | 2.73805E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.5989E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1434 | likely_benign | 0.1467 | benign | -0.085 | Destabilizing | 0.116 | N | 0.389 | neutral | None | None | None | None | I |
Q/C | 0.6551 | likely_pathogenic | 0.6735 | pathogenic | -0.015 | Destabilizing | 0.981 | D | 0.429 | neutral | None | None | None | None | I |
Q/D | 0.3169 | likely_benign | 0.2976 | benign | -0.021 | Destabilizing | 0.116 | N | 0.373 | neutral | None | None | None | None | I |
Q/E | 0.0806 | likely_benign | 0.0767 | benign | -0.056 | Destabilizing | 0.003 | N | 0.113 | neutral | N | 0.437799724 | None | None | I |
Q/F | 0.5513 | ambiguous | 0.5819 | pathogenic | -0.387 | Destabilizing | 0.932 | D | 0.435 | neutral | None | None | None | None | I |
Q/G | 0.2395 | likely_benign | 0.2258 | benign | -0.236 | Destabilizing | 0.388 | N | 0.386 | neutral | None | None | None | None | I |
Q/H | 0.2306 | likely_benign | 0.2215 | benign | 0.005 | Stabilizing | 0.912 | D | 0.39 | neutral | N | 0.497075542 | None | None | I |
Q/I | 0.316 | likely_benign | 0.3331 | benign | 0.216 | Stabilizing | 0.818 | D | 0.456 | neutral | None | None | None | None | I |
Q/K | 0.0914 | likely_benign | 0.0879 | benign | 0.047 | Stabilizing | 0.165 | N | 0.399 | neutral | N | 0.499560259 | None | None | I |
Q/L | 0.1074 | likely_benign | 0.1196 | benign | 0.216 | Stabilizing | 0.324 | N | 0.477 | neutral | N | 0.497541461 | None | None | I |
Q/M | 0.2939 | likely_benign | 0.3259 | benign | 0.189 | Stabilizing | 0.932 | D | 0.389 | neutral | None | None | None | None | I |
Q/N | 0.2657 | likely_benign | 0.2597 | benign | -0.29 | Destabilizing | 0.563 | D | 0.439 | neutral | None | None | None | None | I |
Q/P | 0.0719 | likely_benign | 0.0776 | benign | 0.142 | Stabilizing | 0.001 | N | 0.133 | neutral | N | 0.404638795 | None | None | I |
Q/R | 0.1121 | likely_benign | 0.1136 | benign | 0.25 | Stabilizing | 0.324 | N | 0.417 | neutral | N | 0.516049864 | None | None | I |
Q/S | 0.1667 | likely_benign | 0.1675 | benign | -0.26 | Destabilizing | 0.207 | N | 0.371 | neutral | None | None | None | None | I |
Q/T | 0.1774 | likely_benign | 0.1812 | benign | -0.155 | Destabilizing | 0.388 | N | 0.449 | neutral | None | None | None | None | I |
Q/V | 0.2042 | likely_benign | 0.2151 | benign | 0.142 | Stabilizing | 0.388 | N | 0.477 | neutral | None | None | None | None | I |
Q/W | 0.497 | ambiguous | 0.524 | ambiguous | -0.436 | Destabilizing | 0.981 | D | 0.439 | neutral | None | None | None | None | I |
Q/Y | 0.3936 | ambiguous | 0.4124 | ambiguous | -0.147 | Destabilizing | 0.932 | D | 0.433 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.