Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6883 | 20872;20873;20874 | chr2:178725557;178725556;178725555 | chr2:179590284;179590283;179590282 |
N2AB | 6566 | 19921;19922;19923 | chr2:178725557;178725556;178725555 | chr2:179590284;179590283;179590282 |
N2A | 5639 | 17140;17141;17142 | chr2:178725557;178725556;178725555 | chr2:179590284;179590283;179590282 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs2079192299 | None | 0.31 | N | 0.207 | 0.11 | 0.416075642716 | gnomAD-4.0.0 | 1.59266E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86053E-06 | 0 | 0 |
I/S | rs1392708886 | -2.925 | 0.959 | N | 0.529 | 0.445 | 0.88295878216 | gnomAD-4.0.0 | 1.36891E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79937E-06 | 0 | 0 |
I/T | None | None | 0.959 | N | 0.485 | 0.323 | 0.739771329103 | gnomAD-4.0.0 | 6.84454E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.87336E-05 | 0 | 0 | 0 | 0 |
I/V | None | None | 0.509 | N | 0.34 | 0.17 | 0.618380283371 | gnomAD-4.0.0 | 1.59273E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02645E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6918 | likely_pathogenic | 0.7048 | pathogenic | -2.578 | Highly Destabilizing | 0.863 | D | 0.44 | neutral | None | None | None | None | N |
I/C | 0.8991 | likely_pathogenic | 0.884 | pathogenic | -1.708 | Destabilizing | 0.999 | D | 0.543 | neutral | None | None | None | None | N |
I/D | 0.9724 | likely_pathogenic | 0.9779 | pathogenic | -3.141 | Highly Destabilizing | 0.997 | D | 0.601 | neutral | None | None | None | None | N |
I/E | 0.9603 | likely_pathogenic | 0.9695 | pathogenic | -2.868 | Highly Destabilizing | 0.997 | D | 0.603 | neutral | None | None | None | None | N |
I/F | 0.3766 | ambiguous | 0.341 | ambiguous | -1.53 | Destabilizing | 0.92 | D | 0.518 | neutral | N | 0.486124083 | None | None | N |
I/G | 0.9359 | likely_pathogenic | 0.9399 | pathogenic | -3.154 | Highly Destabilizing | 0.991 | D | 0.607 | neutral | None | None | None | None | N |
I/H | 0.924 | likely_pathogenic | 0.9335 | pathogenic | -2.739 | Highly Destabilizing | 0.999 | D | 0.57 | neutral | None | None | None | None | N |
I/K | 0.905 | likely_pathogenic | 0.9211 | pathogenic | -2.027 | Highly Destabilizing | 0.991 | D | 0.611 | neutral | None | None | None | None | N |
I/L | 0.1534 | likely_benign | 0.1415 | benign | -0.883 | Destabilizing | 0.015 | N | 0.103 | neutral | N | 0.489207193 | None | None | N |
I/M | 0.2249 | likely_benign | 0.2097 | benign | -0.824 | Destabilizing | 0.31 | N | 0.207 | neutral | N | 0.48398449 | None | None | N |
I/N | 0.7723 | likely_pathogenic | 0.8058 | pathogenic | -2.504 | Highly Destabilizing | 0.996 | D | 0.611 | neutral | N | 0.518560385 | None | None | N |
I/P | 0.8927 | likely_pathogenic | 0.9042 | pathogenic | -1.433 | Destabilizing | 0.997 | D | 0.611 | neutral | None | None | None | None | N |
I/Q | 0.9152 | likely_pathogenic | 0.9271 | pathogenic | -2.283 | Highly Destabilizing | 0.991 | D | 0.612 | neutral | None | None | None | None | N |
I/R | 0.8402 | likely_pathogenic | 0.8675 | pathogenic | -1.865 | Destabilizing | 0.991 | D | 0.598 | neutral | None | None | None | None | N |
I/S | 0.7545 | likely_pathogenic | 0.7772 | pathogenic | -3.139 | Highly Destabilizing | 0.959 | D | 0.529 | neutral | N | 0.500113735 | None | None | N |
I/T | 0.7285 | likely_pathogenic | 0.7579 | pathogenic | -2.717 | Highly Destabilizing | 0.959 | D | 0.485 | neutral | N | 0.495340795 | None | None | N |
I/V | 0.0889 | likely_benign | 0.0848 | benign | -1.433 | Destabilizing | 0.509 | D | 0.34 | neutral | N | 0.490541402 | None | None | N |
I/W | 0.9573 | likely_pathogenic | 0.9516 | pathogenic | -2.008 | Highly Destabilizing | 0.999 | D | 0.578 | neutral | None | None | None | None | N |
I/Y | 0.7953 | likely_pathogenic | 0.7923 | pathogenic | -1.692 | Destabilizing | 0.997 | D | 0.566 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.