Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6884 | 20875;20876;20877 | chr2:178725554;178725553;178725552 | chr2:179590281;179590280;179590279 |
N2AB | 6567 | 19924;19925;19926 | chr2:178725554;178725553;178725552 | chr2:179590281;179590280;179590279 |
N2A | 5640 | 17143;17144;17145 | chr2:178725554;178725553;178725552 | chr2:179590281;179590280;179590279 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.001 | N | 0.208 | 0.056 | 0.270447802918 | gnomAD-4.0.0 | 1.59276E-06 | None | None | None | None | N | None | 5.66701E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.1007 | likely_benign | 0.0849 | benign | -1.398 | Destabilizing | None | N | 0.197 | neutral | None | None | None | None | N |
F/C | 0.1669 | likely_benign | 0.1299 | benign | -0.595 | Destabilizing | 0.103 | N | 0.479 | neutral | N | 0.43048975 | None | None | N |
F/D | 0.2827 | likely_benign | 0.2459 | benign | -0.058 | Destabilizing | None | N | 0.296 | neutral | None | None | None | None | N |
F/E | 0.3839 | ambiguous | 0.3478 | ambiguous | -0.051 | Destabilizing | 0.001 | N | 0.319 | neutral | None | None | None | None | N |
F/G | 0.3203 | likely_benign | 0.2686 | benign | -1.633 | Destabilizing | 0.001 | N | 0.344 | neutral | None | None | None | None | N |
F/H | 0.2181 | likely_benign | 0.1916 | benign | -0.046 | Destabilizing | 0.132 | N | 0.493 | neutral | None | None | None | None | N |
F/I | 0.0907 | likely_benign | 0.0759 | benign | -0.749 | Destabilizing | 0.001 | N | 0.201 | neutral | N | 0.392528794 | None | None | N |
F/K | 0.4614 | ambiguous | 0.4005 | ambiguous | -0.626 | Destabilizing | 0.002 | N | 0.316 | neutral | None | None | None | None | N |
F/L | 0.3663 | ambiguous | 0.3157 | benign | -0.749 | Destabilizing | 0.001 | N | 0.208 | neutral | N | 0.386429541 | None | None | N |
F/M | 0.225 | likely_benign | 0.1881 | benign | -0.621 | Destabilizing | 0.041 | N | 0.417 | neutral | None | None | None | None | N |
F/N | 0.1609 | likely_benign | 0.1362 | benign | -0.653 | Destabilizing | 0.002 | N | 0.326 | neutral | None | None | None | None | N |
F/P | 0.845 | likely_pathogenic | 0.8129 | pathogenic | -0.951 | Destabilizing | 0.009 | N | 0.345 | neutral | None | None | None | None | N |
F/Q | 0.352 | ambiguous | 0.2979 | benign | -0.727 | Destabilizing | 0.009 | N | 0.438 | neutral | None | None | None | None | N |
F/R | 0.3384 | likely_benign | 0.2984 | benign | -0.04 | Destabilizing | 0.009 | N | 0.413 | neutral | None | None | None | None | N |
F/S | 0.0635 | likely_benign | 0.0578 | benign | -1.288 | Destabilizing | None | N | 0.206 | neutral | N | 0.270351732 | None | None | N |
F/T | 0.077 | likely_benign | 0.0639 | benign | -1.189 | Destabilizing | None | N | 0.198 | neutral | None | None | None | None | N |
F/V | 0.0865 | likely_benign | 0.0722 | benign | -0.951 | Destabilizing | None | N | 0.177 | neutral | N | 0.381234365 | None | None | N |
F/W | 0.3084 | likely_benign | 0.2896 | benign | -0.355 | Destabilizing | 0.316 | N | 0.403 | neutral | None | None | None | None | N |
F/Y | 0.0941 | likely_benign | 0.0901 | benign | -0.447 | Destabilizing | 0.013 | N | 0.392 | neutral | N | 0.430316392 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.