Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6885 | 20878;20879;20880 | chr2:178725551;178725550;178725549 | chr2:179590278;179590277;179590276 |
N2AB | 6568 | 19927;19928;19929 | chr2:178725551;178725550;178725549 | chr2:179590278;179590277;179590276 |
N2A | 5641 | 17146;17147;17148 | chr2:178725551;178725550;178725549 | chr2:179590278;179590277;179590276 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs2079191317 | None | 0.543 | N | 0.285 | 0.266 | 0.63713380425 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs2079191317 | None | 0.543 | N | 0.285 | 0.266 | 0.63713380425 | gnomAD-4.0.0 | 6.57609E-06 | None | None | None | None | N | None | 2.41394E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.559 | ambiguous | 0.5515 | ambiguous | -1.698 | Destabilizing | 0.994 | D | 0.663 | neutral | D | 0.61401792 | None | None | N |
V/C | 0.8899 | likely_pathogenic | 0.8829 | pathogenic | -1.054 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/D | 0.974 | likely_pathogenic | 0.979 | pathogenic | -1.861 | Destabilizing | 0.999 | D | 0.844 | deleterious | D | 0.615026942 | None | None | N |
V/E | 0.9324 | likely_pathogenic | 0.9387 | pathogenic | -1.715 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
V/F | 0.4143 | ambiguous | 0.4311 | ambiguous | -1.041 | Destabilizing | 0.997 | D | 0.756 | deleterious | D | 0.58154523 | None | None | N |
V/G | 0.7501 | likely_pathogenic | 0.7672 | pathogenic | -2.146 | Highly Destabilizing | 0.999 | D | 0.841 | deleterious | D | 0.615026942 | None | None | N |
V/H | 0.9664 | likely_pathogenic | 0.9661 | pathogenic | -1.719 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
V/I | 0.0901 | likely_benign | 0.083 | benign | -0.495 | Destabilizing | 0.543 | D | 0.285 | neutral | N | 0.505745231 | None | None | N |
V/K | 0.939 | likely_pathogenic | 0.9422 | pathogenic | -1.436 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
V/L | 0.3653 | ambiguous | 0.3468 | ambiguous | -0.495 | Destabilizing | 0.217 | N | 0.321 | neutral | D | 0.567131379 | None | None | N |
V/M | 0.4046 | ambiguous | 0.3852 | ambiguous | -0.42 | Destabilizing | 0.998 | D | 0.697 | prob.neutral | None | None | None | None | N |
V/N | 0.939 | likely_pathogenic | 0.9376 | pathogenic | -1.505 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
V/P | 0.8855 | likely_pathogenic | 0.8863 | pathogenic | -0.866 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
V/Q | 0.9045 | likely_pathogenic | 0.9107 | pathogenic | -1.463 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
V/R | 0.9011 | likely_pathogenic | 0.9105 | pathogenic | -1.159 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
V/S | 0.7694 | likely_pathogenic | 0.7619 | pathogenic | -2.078 | Highly Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
V/T | 0.5857 | likely_pathogenic | 0.5457 | ambiguous | -1.797 | Destabilizing | 0.996 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/W | 0.9631 | likely_pathogenic | 0.9616 | pathogenic | -1.419 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
V/Y | 0.8986 | likely_pathogenic | 0.9005 | pathogenic | -1.039 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.