Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6898 | 20917;20918;20919 | chr2:178725512;178725511;178725510 | chr2:179590239;179590238;179590237 |
N2AB | 6581 | 19966;19967;19968 | chr2:178725512;178725511;178725510 | chr2:179590239;179590238;179590237 |
N2A | 5654 | 17185;17186;17187 | chr2:178725512;178725511;178725510 | chr2:179590239;179590238;179590237 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | rs878854291 | None | 0.005 | N | 0.119 | 0.098 | 0.0806252709748 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
S/G | rs878854291 | None | 0.005 | N | 0.119 | 0.098 | 0.0806252709748 | gnomAD-4.0.0 | 8.05822E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.01736E-05 | 0 | 1.60149E-05 |
S/R | rs878854291 | None | 0.988 | N | 0.318 | 0.282 | 0.281780670237 | gnomAD-4.0.0 | 1.59237E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86026E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1618 | likely_benign | 0.1481 | benign | -0.207 | Destabilizing | 0.079 | N | 0.156 | neutral | None | None | None | None | N |
S/C | 0.3218 | likely_benign | 0.3076 | benign | -0.281 | Destabilizing | 0.999 | D | 0.296 | neutral | N | 0.50875802 | None | None | N |
S/D | 0.4084 | ambiguous | 0.3711 | ambiguous | 0.02 | Stabilizing | 0.046 | N | 0.191 | neutral | None | None | None | None | N |
S/E | 0.7148 | likely_pathogenic | 0.692 | pathogenic | -0.084 | Destabilizing | 0.884 | D | 0.33 | neutral | None | None | None | None | N |
S/F | 0.4885 | ambiguous | 0.4686 | ambiguous | -0.845 | Destabilizing | 0.997 | D | 0.374 | neutral | None | None | None | None | N |
S/G | 0.1136 | likely_benign | 0.1008 | benign | -0.296 | Destabilizing | 0.005 | N | 0.119 | neutral | N | 0.484203152 | None | None | N |
S/H | 0.6208 | likely_pathogenic | 0.5983 | pathogenic | -0.762 | Destabilizing | 0.997 | D | 0.293 | neutral | None | None | None | None | N |
S/I | 0.5834 | likely_pathogenic | 0.5525 | ambiguous | -0.109 | Destabilizing | 0.988 | D | 0.396 | neutral | N | 0.497148225 | None | None | N |
S/K | 0.8564 | likely_pathogenic | 0.8526 | pathogenic | -0.505 | Destabilizing | 0.969 | D | 0.328 | neutral | None | None | None | None | N |
S/L | 0.2338 | likely_benign | 0.2147 | benign | -0.109 | Destabilizing | 0.939 | D | 0.419 | neutral | None | None | None | None | N |
S/M | 0.4083 | ambiguous | 0.3646 | ambiguous | 0.018 | Stabilizing | 0.999 | D | 0.291 | neutral | None | None | None | None | N |
S/N | 0.1916 | likely_benign | 0.1535 | benign | -0.209 | Destabilizing | 0.92 | D | 0.382 | neutral | N | 0.469418731 | None | None | N |
S/P | 0.8122 | likely_pathogenic | 0.8368 | pathogenic | -0.114 | Destabilizing | 0.991 | D | 0.319 | neutral | None | None | None | None | N |
S/Q | 0.7686 | likely_pathogenic | 0.7427 | pathogenic | -0.454 | Destabilizing | 0.991 | D | 0.338 | neutral | None | None | None | None | N |
S/R | 0.8253 | likely_pathogenic | 0.8261 | pathogenic | -0.27 | Destabilizing | 0.988 | D | 0.318 | neutral | N | 0.478030012 | None | None | N |
S/T | 0.1228 | likely_benign | 0.1018 | benign | -0.296 | Destabilizing | 0.92 | D | 0.375 | neutral | N | 0.474293803 | None | None | N |
S/V | 0.534 | ambiguous | 0.4829 | ambiguous | -0.114 | Destabilizing | 0.939 | D | 0.411 | neutral | None | None | None | None | N |
S/W | 0.5866 | likely_pathogenic | 0.6075 | pathogenic | -0.905 | Destabilizing | 0.999 | D | 0.477 | neutral | None | None | None | None | N |
S/Y | 0.3954 | ambiguous | 0.4044 | ambiguous | -0.608 | Destabilizing | 0.997 | D | 0.373 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.