Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6902 | 20929;20930;20931 | chr2:178725500;178725499;178725498 | chr2:179590227;179590226;179590225 |
N2AB | 6585 | 19978;19979;19980 | chr2:178725500;178725499;178725498 | chr2:179590227;179590226;179590225 |
N2A | 5658 | 17197;17198;17199 | chr2:178725500;178725499;178725498 | chr2:179590227;179590226;179590225 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.001 | N | 0.118 | 0.096 | 0.181679512989 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
R/M | rs2079182473 | None | 0.963 | N | 0.395 | 0.479 | 0.444305618086 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/M | rs2079182473 | None | 0.963 | N | 0.395 | 0.479 | 0.444305618086 | gnomAD-4.0.0 | 6.57324E-06 | None | None | None | None | N | None | 2.41313E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2414 | likely_benign | 0.2392 | benign | -0.275 | Destabilizing | 0.25 | N | 0.321 | neutral | None | None | None | None | N |
R/C | 0.1779 | likely_benign | 0.1642 | benign | -0.269 | Destabilizing | 0.992 | D | 0.43 | neutral | None | None | None | None | N |
R/D | 0.4491 | ambiguous | 0.4421 | ambiguous | -0.008 | Destabilizing | 0.617 | D | 0.386 | neutral | None | None | None | None | N |
R/E | 0.23 | likely_benign | 0.2217 | benign | 0.077 | Stabilizing | 0.25 | N | 0.274 | neutral | None | None | None | None | N |
R/F | 0.3731 | ambiguous | 0.3472 | ambiguous | -0.343 | Destabilizing | 0.92 | D | 0.44 | neutral | None | None | None | None | N |
R/G | 0.1688 | likely_benign | 0.1705 | benign | -0.527 | Destabilizing | 0.549 | D | 0.381 | neutral | N | 0.499090231 | None | None | N |
R/H | 0.0836 | likely_benign | 0.078 | benign | -0.949 | Destabilizing | 0.92 | D | 0.363 | neutral | None | None | None | None | N |
R/I | 0.1822 | likely_benign | 0.1788 | benign | 0.371 | Stabilizing | 0.85 | D | 0.44 | neutral | None | None | None | None | N |
R/K | 0.0876 | likely_benign | 0.0796 | benign | -0.317 | Destabilizing | 0.001 | N | 0.118 | neutral | N | 0.466082404 | None | None | N |
R/L | 0.1886 | likely_benign | 0.1843 | benign | 0.371 | Stabilizing | 0.447 | N | 0.389 | neutral | None | None | None | None | N |
R/M | 0.1913 | likely_benign | 0.1841 | benign | 0.023 | Stabilizing | 0.963 | D | 0.395 | neutral | N | 0.492342282 | None | None | N |
R/N | 0.33 | likely_benign | 0.319 | benign | 0.119 | Stabilizing | 0.617 | D | 0.239 | neutral | None | None | None | None | N |
R/P | 0.8184 | likely_pathogenic | 0.85 | pathogenic | 0.177 | Stabilizing | 0.766 | D | 0.423 | neutral | None | None | None | None | N |
R/Q | 0.0859 | likely_benign | 0.0803 | benign | -0.05 | Destabilizing | 0.059 | N | 0.193 | neutral | None | None | None | None | N |
R/S | 0.248 | likely_benign | 0.2451 | benign | -0.428 | Destabilizing | 0.201 | N | 0.315 | neutral | N | 0.487055109 | None | None | N |
R/T | 0.1354 | likely_benign | 0.1281 | benign | -0.187 | Destabilizing | 0.016 | N | 0.22 | neutral | N | 0.483246799 | None | None | N |
R/V | 0.2438 | likely_benign | 0.2315 | benign | 0.177 | Stabilizing | 0.447 | N | 0.413 | neutral | None | None | None | None | N |
R/W | 0.1256 | likely_benign | 0.1193 | benign | -0.211 | Destabilizing | 0.99 | D | 0.444 | neutral | N | 0.472339159 | None | None | N |
R/Y | 0.27 | likely_benign | 0.2449 | benign | 0.154 | Stabilizing | 0.972 | D | 0.423 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.