Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6909 | 20950;20951;20952 | chr2:178725479;178725478;178725477 | chr2:179590206;179590205;179590204 |
N2AB | 6592 | 19999;20000;20001 | chr2:178725479;178725478;178725477 | chr2:179590206;179590205;179590204 |
N2A | 5665 | 17218;17219;17220 | chr2:178725479;178725478;178725477 | chr2:179590206;179590205;179590204 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | rs1316718244 | None | 0.193 | D | 0.611 | 0.282 | 0.716185225888 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/D | rs1316718244 | None | 0.193 | D | 0.611 | 0.282 | 0.716185225888 | gnomAD-4.0.0 | 6.57255E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4705E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1523 | likely_benign | 0.1532 | benign | -1.56 | Destabilizing | 0.09 | N | 0.46 | neutral | N | 0.482210063 | None | None | N |
V/C | 0.6373 | likely_pathogenic | 0.6168 | pathogenic | -1.175 | Destabilizing | 0.981 | D | 0.511 | neutral | None | None | None | None | N |
V/D | 0.3046 | likely_benign | 0.3016 | benign | -1.425 | Destabilizing | 0.193 | N | 0.611 | neutral | D | 0.528208298 | None | None | N |
V/E | 0.2116 | likely_benign | 0.2097 | benign | -1.39 | Destabilizing | 0.008 | N | 0.413 | neutral | None | None | None | None | N |
V/F | 0.1235 | likely_benign | 0.1213 | benign | -1.205 | Destabilizing | 0.627 | D | 0.561 | neutral | N | 0.499215136 | None | None | N |
V/G | 0.2216 | likely_benign | 0.2355 | benign | -1.911 | Destabilizing | 0.324 | N | 0.609 | neutral | N | 0.490826133 | None | None | N |
V/H | 0.3453 | ambiguous | 0.3307 | benign | -1.488 | Destabilizing | 0.981 | D | 0.617 | neutral | None | None | None | None | N |
V/I | 0.0679 | likely_benign | 0.0642 | benign | -0.682 | Destabilizing | 0.001 | N | 0.133 | neutral | N | 0.447053926 | None | None | N |
V/K | 0.1683 | likely_benign | 0.1608 | benign | -1.149 | Destabilizing | 0.388 | N | 0.582 | neutral | None | None | None | None | N |
V/L | 0.1666 | likely_benign | 0.1539 | benign | -0.682 | Destabilizing | 0.033 | N | 0.409 | neutral | D | 0.528901731 | None | None | N |
V/M | 0.1046 | likely_benign | 0.0972 | benign | -0.607 | Destabilizing | 0.69 | D | 0.5 | neutral | None | None | None | None | N |
V/N | 0.2027 | likely_benign | 0.1943 | benign | -1.036 | Destabilizing | 0.69 | D | 0.627 | neutral | None | None | None | None | N |
V/P | 0.8988 | likely_pathogenic | 0.9167 | pathogenic | -0.941 | Destabilizing | 0.818 | D | 0.596 | neutral | None | None | None | None | N |
V/Q | 0.2057 | likely_benign | 0.2007 | benign | -1.171 | Destabilizing | 0.69 | D | 0.601 | neutral | None | None | None | None | N |
V/R | 0.1441 | likely_benign | 0.1442 | benign | -0.73 | Destabilizing | 0.69 | D | 0.637 | neutral | None | None | None | None | N |
V/S | 0.1799 | likely_benign | 0.1806 | benign | -1.623 | Destabilizing | 0.241 | N | 0.559 | neutral | None | None | None | None | N |
V/T | 0.1126 | likely_benign | 0.1075 | benign | -1.472 | Destabilizing | 0.008 | N | 0.306 | neutral | None | None | None | None | N |
V/W | 0.6433 | likely_pathogenic | 0.6204 | pathogenic | -1.433 | Destabilizing | 0.981 | D | 0.657 | neutral | None | None | None | None | N |
V/Y | 0.3622 | ambiguous | 0.3475 | ambiguous | -1.102 | Destabilizing | 0.818 | D | 0.566 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.