Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6911 | 20956;20957;20958 | chr2:178725473;178725472;178725471 | chr2:179590200;179590199;179590198 |
N2AB | 6594 | 20005;20006;20007 | chr2:178725473;178725472;178725471 | chr2:179590200;179590199;179590198 |
N2A | 5667 | 17224;17225;17226 | chr2:178725473;178725472;178725471 | chr2:179590200;179590199;179590198 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.996 | N | 0.454 | 0.511 | 0.489728331402 | gnomAD-4.0.0 | 1.59258E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02663E-05 |
T/P | None | None | 1.0 | D | 0.752 | 0.686 | 0.581280949539 | gnomAD-4.0.0 | 3.18516E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72076E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0858 | likely_benign | 0.0846 | benign | -1.118 | Destabilizing | 0.996 | D | 0.454 | neutral | N | 0.521148187 | None | None | N |
T/C | 0.3819 | ambiguous | 0.3507 | ambiguous | -0.956 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
T/D | 0.6736 | likely_pathogenic | 0.6573 | pathogenic | -1.89 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
T/E | 0.4188 | ambiguous | 0.4171 | ambiguous | -1.682 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
T/F | 0.2233 | likely_benign | 0.1947 | benign | -0.694 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
T/G | 0.3307 | likely_benign | 0.3231 | benign | -1.531 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
T/H | 0.2424 | likely_benign | 0.2255 | benign | -1.71 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
T/I | 0.1558 | likely_benign | 0.1389 | benign | -0.03 | Destabilizing | 0.998 | D | 0.679 | prob.neutral | N | 0.504564869 | None | None | N |
T/K | 0.1712 | likely_benign | 0.1696 | benign | -0.736 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
T/L | 0.1092 | likely_benign | 0.1005 | benign | -0.03 | Destabilizing | 0.994 | D | 0.491 | neutral | None | None | None | None | N |
T/M | 0.1026 | likely_benign | 0.0975 | benign | -0.155 | Destabilizing | 0.985 | D | 0.431 | neutral | None | None | None | None | N |
T/N | 0.2067 | likely_benign | 0.1967 | benign | -1.473 | Destabilizing | 1.0 | D | 0.664 | neutral | N | 0.521908655 | None | None | N |
T/P | 0.8386 | likely_pathogenic | 0.8579 | pathogenic | -0.362 | Destabilizing | 1.0 | D | 0.752 | deleterious | D | 0.534025429 | None | None | N |
T/Q | 0.2302 | likely_benign | 0.226 | benign | -1.194 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
T/R | 0.136 | likely_benign | 0.1336 | benign | -0.982 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
T/S | 0.1311 | likely_benign | 0.1231 | benign | -1.595 | Destabilizing | 0.998 | D | 0.443 | neutral | N | 0.479977208 | None | None | N |
T/V | 0.1165 | likely_benign | 0.1105 | benign | -0.362 | Destabilizing | 0.994 | D | 0.443 | neutral | None | None | None | None | N |
T/W | 0.6157 | likely_pathogenic | 0.5867 | pathogenic | -0.965 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
T/Y | 0.2789 | likely_benign | 0.2567 | benign | -0.558 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.