Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6913 | 20962;20963;20964 | chr2:178725467;178725466;178725465 | chr2:179590194;179590193;179590192 |
N2AB | 6596 | 20011;20012;20013 | chr2:178725467;178725466;178725465 | chr2:179590194;179590193;179590192 |
N2A | 5669 | 17230;17231;17232 | chr2:178725467;178725466;178725465 | chr2:179590194;179590193;179590192 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | 0.991 | N | 0.455 | 0.311 | 0.269111216191 | gnomAD-4.0.0 | 1.59294E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86066E-06 | 0 | 0 |
Q/R | rs1352796608 | None | 0.719 | N | 0.389 | 0.13 | 0.218112801441 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Q/R | rs1352796608 | None | 0.719 | N | 0.389 | 0.13 | 0.218112801441 | gnomAD-4.0.0 | 2.56397E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78927E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2985 | likely_benign | 0.271 | benign | -0.834 | Destabilizing | 0.037 | N | 0.297 | neutral | None | None | None | None | N |
Q/C | 0.5583 | ambiguous | 0.4845 | ambiguous | -0.342 | Destabilizing | 0.993 | D | 0.457 | neutral | None | None | None | None | N |
Q/D | 0.547 | ambiguous | 0.5304 | ambiguous | -1.195 | Destabilizing | 0.932 | D | 0.377 | neutral | None | None | None | None | N |
Q/E | 0.1057 | likely_benign | 0.1038 | benign | -1.015 | Destabilizing | 0.679 | D | 0.361 | neutral | N | 0.499309543 | None | None | N |
Q/F | 0.5614 | ambiguous | 0.5149 | ambiguous | -0.366 | Destabilizing | 0.96 | D | 0.541 | neutral | None | None | None | None | N |
Q/G | 0.4115 | ambiguous | 0.3787 | ambiguous | -1.253 | Destabilizing | 0.737 | D | 0.421 | neutral | None | None | None | None | N |
Q/H | 0.1744 | likely_benign | 0.1456 | benign | -1.019 | Destabilizing | 0.991 | D | 0.455 | neutral | N | 0.506083587 | None | None | N |
Q/I | 0.3289 | likely_benign | 0.3029 | benign | 0.271 | Stabilizing | 0.037 | N | 0.447 | neutral | None | None | None | None | N |
Q/K | 0.1194 | likely_benign | 0.1121 | benign | -0.417 | Destabilizing | 0.028 | N | 0.226 | neutral | N | 0.451345025 | None | None | N |
Q/L | 0.1468 | likely_benign | 0.1378 | benign | 0.271 | Stabilizing | 0.007 | N | 0.388 | neutral | N | 0.511508049 | None | None | N |
Q/M | 0.3952 | ambiguous | 0.3689 | ambiguous | 0.598 | Stabilizing | 0.96 | D | 0.446 | neutral | None | None | None | None | N |
Q/N | 0.3777 | ambiguous | 0.3443 | ambiguous | -1.128 | Destabilizing | 0.932 | D | 0.412 | neutral | None | None | None | None | N |
Q/P | 0.8017 | likely_pathogenic | 0.8155 | pathogenic | -0.067 | Destabilizing | 0.912 | D | 0.482 | neutral | N | 0.507431116 | None | None | N |
Q/R | 0.1043 | likely_benign | 0.094 | benign | -0.462 | Destabilizing | 0.719 | D | 0.389 | neutral | N | 0.512372054 | None | None | N |
Q/S | 0.3038 | likely_benign | 0.2744 | benign | -1.293 | Destabilizing | 0.584 | D | 0.365 | neutral | None | None | None | None | N |
Q/T | 0.2328 | likely_benign | 0.2043 | benign | -0.909 | Destabilizing | 0.737 | D | 0.425 | neutral | None | None | None | None | N |
Q/V | 0.2463 | likely_benign | 0.2226 | benign | -0.067 | Destabilizing | 0.037 | N | 0.369 | neutral | None | None | None | None | N |
Q/W | 0.4489 | ambiguous | 0.3918 | ambiguous | -0.269 | Destabilizing | 0.998 | D | 0.487 | neutral | None | None | None | None | N |
Q/Y | 0.3521 | ambiguous | 0.3049 | benign | 0.018 | Stabilizing | 0.993 | D | 0.551 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.