Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6958 | 21097;21098;21099 | chr2:178724503;178724502;178724501 | chr2:179589230;179589229;179589228 |
N2AB | 6641 | 20146;20147;20148 | chr2:178724503;178724502;178724501 | chr2:179589230;179589229;179589228 |
N2A | 5714 | 17365;17366;17367 | chr2:178724503;178724502;178724501 | chr2:179589230;179589229;179589228 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.139 | N | 0.185 | 0.108 | 0.215869574891 | gnomAD-4.0.0 | 1.60919E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.90225E-06 | 0 | 0 |
T/M | rs371824963 | 0.112 | 0.282 | N | 0.163 | 0.183 | None | gnomAD-2.1.1 | 2.44E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.11794E-04 | None | 3.32E-05 | None | 0 | 2.69E-05 | 0 |
T/M | rs371824963 | 0.112 | 0.282 | N | 0.163 | 0.183 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/M | rs371824963 | 0.112 | 0.282 | N | 0.163 | 0.183 | None | gnomAD-4.0.0 | 1.05806E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 4.47688E-05 | None | 0 | 1.65453E-04 | 1.02167E-05 | 1.10263E-05 | 1.60932E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.072 | likely_benign | 0.0767 | benign | -0.54 | Destabilizing | 0.139 | N | 0.185 | neutral | N | 0.478070266 | None | None | I |
T/C | 0.4365 | ambiguous | 0.4818 | ambiguous | -0.33 | Destabilizing | 0.981 | D | 0.316 | neutral | None | None | None | None | I |
T/D | 0.296 | likely_benign | 0.3504 | ambiguous | -0.002 | Destabilizing | 0.704 | D | 0.322 | neutral | None | None | None | None | I |
T/E | 0.1971 | likely_benign | 0.2202 | benign | -0.061 | Destabilizing | 0.329 | N | 0.297 | neutral | None | None | None | None | I |
T/F | 0.1853 | likely_benign | 0.2065 | benign | -0.909 | Destabilizing | 0.893 | D | 0.393 | neutral | None | None | None | None | I |
T/G | 0.239 | likely_benign | 0.2518 | benign | -0.71 | Destabilizing | 0.495 | N | 0.277 | neutral | None | None | None | None | I |
T/H | 0.1685 | likely_benign | 0.1935 | benign | -1.04 | Destabilizing | 0.944 | D | 0.305 | neutral | None | None | None | None | I |
T/I | 0.1265 | likely_benign | 0.1365 | benign | -0.201 | Destabilizing | 0.543 | D | 0.361 | neutral | None | None | None | None | I |
T/K | 0.1078 | likely_benign | 0.1159 | benign | -0.509 | Destabilizing | 0.002 | N | 0.112 | neutral | N | 0.483745445 | None | None | I |
T/L | 0.0826 | likely_benign | 0.086 | benign | -0.201 | Destabilizing | 0.069 | N | 0.242 | neutral | None | None | None | None | I |
T/M | 0.0735 | likely_benign | 0.0741 | benign | 0.094 | Stabilizing | 0.282 | N | 0.163 | neutral | N | 0.512665629 | None | None | I |
T/N | 0.0997 | likely_benign | 0.1098 | benign | -0.312 | Destabilizing | 0.495 | N | 0.22 | neutral | None | None | None | None | I |
T/P | 0.1298 | likely_benign | 0.1536 | benign | -0.284 | Destabilizing | 0.784 | D | 0.357 | neutral | N | 0.48897492 | None | None | I |
T/Q | 0.1426 | likely_benign | 0.1573 | benign | -0.569 | Destabilizing | 0.704 | D | 0.356 | neutral | None | None | None | None | I |
T/R | 0.0827 | likely_benign | 0.0886 | benign | -0.214 | Destabilizing | 0.014 | N | 0.165 | neutral | N | 0.475166034 | None | None | I |
T/S | 0.104 | likely_benign | 0.1117 | benign | -0.553 | Destabilizing | 0.01 | N | 0.099 | neutral | N | 0.467911987 | None | None | I |
T/V | 0.1109 | likely_benign | 0.1129 | benign | -0.284 | Destabilizing | 0.329 | N | 0.239 | neutral | None | None | None | None | I |
T/W | 0.4221 | ambiguous | 0.4587 | ambiguous | -0.858 | Destabilizing | 0.995 | D | 0.291 | neutral | None | None | None | None | I |
T/Y | 0.2086 | likely_benign | 0.2364 | benign | -0.603 | Destabilizing | 0.944 | D | 0.368 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.