Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6975 | 21148;21149;21150 | chr2:178724452;178724451;178724450 | chr2:179589179;179589178;179589177 |
N2AB | 6658 | 20197;20198;20199 | chr2:178724452;178724451;178724450 | chr2:179589179;179589178;179589177 |
N2A | 5731 | 17416;17417;17418 | chr2:178724452;178724451;178724450 | chr2:179589179;179589178;179589177 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs374493881 | 0.018 | 0.998 | D | 0.57 | 0.615 | None | gnomAD-2.1.1 | 2.82E-05 | None | None | None | None | I | None | 1.93874E-04 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 2.67E-05 | 0 |
P/L | rs374493881 | 0.018 | 0.998 | D | 0.57 | 0.615 | None | gnomAD-3.1.2 | 6.58E-05 | None | None | None | None | I | None | 1.93115E-04 | 0 | 0 | 0 | 1.92976E-04 | None | 0 | 0 | 0 | 0 | 4.78011E-04 |
P/L | rs374493881 | 0.018 | 0.998 | D | 0.57 | 0.615 | None | gnomAD-4.0.0 | 2.54156E-05 | None | None | None | None | I | None | 2.40442E-04 | 0 | None | 0 | 2.22985E-05 | None | 0 | 1.64636E-04 | 1.27172E-05 | 3.29468E-05 | 4.80646E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.3489 | ambiguous | 0.7333 | pathogenic | -0.314 | Destabilizing | 0.911 | D | 0.369 | neutral | D | 0.529197399 | None | None | I |
P/C | 0.9346 | likely_pathogenic | 0.9897 | pathogenic | -0.7 | Destabilizing | 1.0 | D | 0.597 | neutral | None | None | None | None | I |
P/D | 0.8539 | likely_pathogenic | 0.9595 | pathogenic | -0.388 | Destabilizing | 0.985 | D | 0.459 | neutral | None | None | None | None | I |
P/E | 0.65 | likely_pathogenic | 0.9089 | pathogenic | -0.51 | Destabilizing | 0.985 | D | 0.403 | neutral | None | None | None | None | I |
P/F | 0.9516 | likely_pathogenic | 0.9923 | pathogenic | -0.688 | Destabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | I |
P/G | 0.7446 | likely_pathogenic | 0.9139 | pathogenic | -0.382 | Destabilizing | 0.985 | D | 0.451 | neutral | None | None | None | None | I |
P/H | 0.7217 | likely_pathogenic | 0.9503 | pathogenic | 0.037 | Stabilizing | 1.0 | D | 0.541 | neutral | None | None | None | None | I |
P/I | 0.8507 | likely_pathogenic | 0.9553 | pathogenic | -0.282 | Destabilizing | 0.998 | D | 0.6 | neutral | None | None | None | None | I |
P/K | 0.6885 | likely_pathogenic | 0.9426 | pathogenic | -0.371 | Destabilizing | 0.271 | N | 0.224 | neutral | None | None | None | None | I |
P/L | 0.522 | ambiguous | 0.588 | pathogenic | -0.282 | Destabilizing | 0.998 | D | 0.57 | neutral | D | 0.607599468 | None | None | I |
P/M | 0.7952 | likely_pathogenic | 0.9515 | pathogenic | -0.506 | Destabilizing | 1.0 | D | 0.54 | neutral | None | None | None | None | I |
P/N | 0.8429 | likely_pathogenic | 0.9631 | pathogenic | -0.132 | Destabilizing | 0.996 | D | 0.518 | neutral | None | None | None | None | I |
P/Q | 0.5521 | ambiguous | 0.8959 | pathogenic | -0.372 | Destabilizing | 0.998 | D | 0.461 | neutral | D | 0.532159914 | None | None | I |
P/R | 0.5445 | ambiguous | 0.8948 | pathogenic | 0.115 | Stabilizing | 0.984 | D | 0.506 | neutral | D | 0.607195859 | None | None | I |
P/S | 0.5518 | ambiguous | 0.8815 | pathogenic | -0.429 | Destabilizing | 0.659 | D | 0.236 | neutral | D | 0.527373747 | None | None | I |
P/T | 0.4463 | ambiguous | 0.7749 | pathogenic | -0.462 | Destabilizing | 0.961 | D | 0.398 | neutral | D | 0.568192198 | None | None | I |
P/V | 0.7011 | likely_pathogenic | 0.8942 | pathogenic | -0.263 | Destabilizing | 0.993 | D | 0.499 | neutral | None | None | None | None | I |
P/W | 0.96 | likely_pathogenic | 0.9931 | pathogenic | -0.746 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | I |
P/Y | 0.9255 | likely_pathogenic | 0.9875 | pathogenic | -0.462 | Destabilizing | 0.999 | D | 0.604 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.