Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6977 | 21154;21155;21156 | chr2:178724446;178724445;178724444 | chr2:179589173;179589172;179589171 |
N2AB | 6660 | 20203;20204;20205 | chr2:178724446;178724445;178724444 | chr2:179589173;179589172;179589171 |
N2A | 5733 | 17422;17423;17424 | chr2:178724446;178724445;178724444 | chr2:179589173;179589172;179589171 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/H | None | None | 1.0 | D | 0.683 | 0.639 | 0.887685046922 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
L/P | rs1201922048 | -1.684 | 1.0 | N | 0.765 | 0.538 | 0.768461157586 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 1.14916E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/P | rs1201922048 | -1.684 | 1.0 | N | 0.765 | 0.538 | 0.768461157586 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/P | rs1201922048 | -1.684 | 1.0 | N | 0.765 | 0.538 | 0.768461157586 | gnomAD-4.0.0 | 6.57583E-06 | None | None | None | None | I | None | 2.41359E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.834 | likely_pathogenic | 0.8276 | pathogenic | -2.026 | Highly Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | I |
L/C | 0.9007 | likely_pathogenic | 0.903 | pathogenic | -1.519 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | I |
L/D | 0.9874 | likely_pathogenic | 0.9883 | pathogenic | -1.126 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
L/E | 0.9509 | likely_pathogenic | 0.9589 | pathogenic | -1.048 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
L/F | 0.5691 | likely_pathogenic | 0.6194 | pathogenic | -1.31 | Destabilizing | 1.0 | D | 0.775 | deleterious | N | 0.508683962 | None | None | I |
L/G | 0.9597 | likely_pathogenic | 0.9597 | pathogenic | -2.438 | Highly Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
L/H | 0.9135 | likely_pathogenic | 0.9312 | pathogenic | -1.579 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | D | 0.531022103 | None | None | I |
L/I | 0.172 | likely_benign | 0.1987 | benign | -0.925 | Destabilizing | 0.999 | D | 0.604 | neutral | N | 0.472165801 | None | None | I |
L/K | 0.925 | likely_pathogenic | 0.9386 | pathogenic | -1.363 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
L/M | 0.2944 | likely_benign | 0.3287 | benign | -0.872 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
L/N | 0.9301 | likely_pathogenic | 0.9357 | pathogenic | -1.278 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
L/P | 0.69 | likely_pathogenic | 0.6283 | pathogenic | -1.262 | Destabilizing | 1.0 | D | 0.765 | deleterious | N | 0.361392237 | None | None | I |
L/Q | 0.8682 | likely_pathogenic | 0.8971 | pathogenic | -1.344 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
L/R | 0.8786 | likely_pathogenic | 0.9055 | pathogenic | -0.877 | Destabilizing | 1.0 | D | 0.766 | deleterious | N | 0.520074391 | None | None | I |
L/S | 0.945 | likely_pathogenic | 0.9494 | pathogenic | -2.069 | Highly Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
L/T | 0.841 | likely_pathogenic | 0.8515 | pathogenic | -1.849 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
L/V | 0.2477 | likely_benign | 0.2631 | benign | -1.262 | Destabilizing | 0.999 | D | 0.554 | neutral | N | 0.48401759 | None | None | I |
L/W | 0.8624 | likely_pathogenic | 0.8897 | pathogenic | -1.369 | Destabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | I |
L/Y | 0.8739 | likely_pathogenic | 0.8942 | pathogenic | -1.159 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.