Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6984 | 21175;21176;21177 | chr2:178724425;178724424;178724423 | chr2:179589152;179589151;179589150 |
N2AB | 6667 | 20224;20225;20226 | chr2:178724425;178724424;178724423 | chr2:179589152;179589151;179589150 |
N2A | 5740 | 17443;17444;17445 | chr2:178724425;178724424;178724423 | chr2:179589152;179589151;179589150 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.801 | N | 0.421 | 0.255 | 0.136095386433 | gnomAD-4.0.0 | 1.59206E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43295E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3043 | likely_benign | 0.2894 | benign | -0.572 | Destabilizing | 0.022 | N | 0.225 | neutral | N | 0.47585442 | None | None | N |
D/C | 0.776 | likely_pathogenic | 0.7753 | pathogenic | -0.167 | Destabilizing | 0.998 | D | 0.435 | neutral | None | None | None | None | N |
D/E | 0.2828 | likely_benign | 0.2932 | benign | -0.407 | Destabilizing | 0.012 | N | 0.235 | neutral | N | 0.460090341 | None | None | N |
D/F | 0.7888 | likely_pathogenic | 0.7977 | pathogenic | -0.248 | Destabilizing | 0.991 | D | 0.436 | neutral | None | None | None | None | N |
D/G | 0.1977 | likely_benign | 0.187 | benign | -0.829 | Destabilizing | 0.005 | N | 0.213 | neutral | N | 0.454770742 | None | None | N |
D/H | 0.4594 | ambiguous | 0.4641 | ambiguous | -0.18 | Destabilizing | 0.966 | D | 0.374 | neutral | N | 0.498086505 | None | None | N |
D/I | 0.8088 | likely_pathogenic | 0.7899 | pathogenic | 0.081 | Stabilizing | 0.974 | D | 0.45 | neutral | None | None | None | None | N |
D/K | 0.6365 | likely_pathogenic | 0.6416 | pathogenic | 0.047 | Stabilizing | 0.728 | D | 0.418 | neutral | None | None | None | None | N |
D/L | 0.6978 | likely_pathogenic | 0.6907 | pathogenic | 0.081 | Stabilizing | 0.842 | D | 0.443 | neutral | None | None | None | None | N |
D/M | 0.8494 | likely_pathogenic | 0.8351 | pathogenic | 0.319 | Stabilizing | 0.998 | D | 0.431 | neutral | None | None | None | None | N |
D/N | 0.11 | likely_benign | 0.102 | benign | -0.401 | Destabilizing | 0.801 | D | 0.421 | neutral | N | 0.4648466 | None | None | N |
D/P | 0.9887 | likely_pathogenic | 0.9838 | pathogenic | -0.114 | Destabilizing | 0.974 | D | 0.377 | neutral | None | None | None | None | N |
D/Q | 0.5448 | ambiguous | 0.5372 | ambiguous | -0.324 | Destabilizing | 0.904 | D | 0.346 | neutral | None | None | None | None | N |
D/R | 0.6259 | likely_pathogenic | 0.6289 | pathogenic | 0.294 | Stabilizing | 0.949 | D | 0.425 | neutral | None | None | None | None | N |
D/S | 0.2297 | likely_benign | 0.2093 | benign | -0.541 | Destabilizing | 0.525 | D | 0.37 | neutral | None | None | None | None | N |
D/T | 0.6396 | likely_pathogenic | 0.6028 | pathogenic | -0.329 | Destabilizing | 0.842 | D | 0.418 | neutral | None | None | None | None | N |
D/V | 0.5711 | likely_pathogenic | 0.5576 | ambiguous | -0.114 | Destabilizing | 0.801 | D | 0.463 | neutral | N | 0.489123283 | None | None | N |
D/W | 0.9369 | likely_pathogenic | 0.9361 | pathogenic | -0.008 | Destabilizing | 0.998 | D | 0.521 | neutral | None | None | None | None | N |
D/Y | 0.3255 | likely_benign | 0.3354 | benign | 0.011 | Stabilizing | 0.989 | D | 0.433 | neutral | N | 0.503112934 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.