Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC699021193;21194;21195 chr2:178724407;178724406;178724405chr2:179589134;179589133;179589132
N2AB667320242;20243;20244 chr2:178724407;178724406;178724405chr2:179589134;179589133;179589132
N2A574617461;17462;17463 chr2:178724407;178724406;178724405chr2:179589134;179589133;179589132
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: S
  • RefSeq wild type transcript codon: AGC
  • RefSeq wild type template codon: TCG
  • Domain: Ig-54
  • Domain position: 43
  • Structural Position: 70
  • Q(SASA): 0.4377
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
S/G rs1467185474 -0.248 0.994 N 0.39 0.383 0.267299060538 gnomAD-2.1.1 4.02E-06 None None None None N None 6.46E-05 0 None 0 0 None 0 None 0 0 0
S/G rs1467185474 -0.248 0.994 N 0.39 0.383 0.267299060538 gnomAD-4.0.0 3.18377E-06 None None None None N None 5.66316E-05 0 None 0 0 None 0 0 2.85959E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
S/A 0.0733 likely_benign 0.079 benign -0.418 Destabilizing 0.99 D 0.389 neutral None None None None N
S/C 0.2109 likely_benign 0.2302 benign -0.343 Destabilizing 1.0 D 0.651 neutral N 0.505601599 None None N
S/D 0.3486 ambiguous 0.3983 ambiguous 0.428 Stabilizing 0.269 N 0.245 neutral None None None None N
S/E 0.4629 ambiguous 0.5362 ambiguous 0.341 Stabilizing 0.983 D 0.397 neutral None None None None N
S/F 0.2249 likely_benign 0.2563 benign -1.027 Destabilizing 1.0 D 0.687 prob.neutral None None None None N
S/G 0.0979 likely_benign 0.0937 benign -0.523 Destabilizing 0.994 D 0.39 neutral N 0.471936514 None None N
S/H 0.3914 ambiguous 0.4381 ambiguous -0.94 Destabilizing 1.0 D 0.66 neutral None None None None N
S/I 0.2093 likely_benign 0.2263 benign -0.271 Destabilizing 0.999 D 0.689 prob.neutral N 0.494101298 None None N
S/K 0.6271 likely_pathogenic 0.6933 pathogenic -0.382 Destabilizing 0.996 D 0.465 neutral None None None None N
S/L 0.1225 likely_benign 0.1344 benign -0.271 Destabilizing 1.0 D 0.602 neutral None None None None N
S/M 0.2615 likely_benign 0.273 benign -0.15 Destabilizing 1.0 D 0.658 neutral None None None None N
S/N 0.1596 likely_benign 0.1565 benign -0.148 Destabilizing 0.989 D 0.421 neutral N 0.46198888 None None N
S/P 0.0969 likely_benign 0.1071 benign -0.292 Destabilizing 1.0 D 0.677 prob.neutral None None None None N
S/Q 0.4955 ambiguous 0.5441 ambiguous -0.344 Destabilizing 0.999 D 0.599 neutral None None None None N
S/R 0.5455 ambiguous 0.6139 pathogenic -0.208 Destabilizing 0.998 D 0.684 prob.neutral N 0.484788382 None None N
S/T 0.0983 likely_benign 0.0946 benign -0.278 Destabilizing 0.994 D 0.387 neutral N 0.465682546 None None N
S/V 0.1922 likely_benign 0.2098 benign -0.292 Destabilizing 1.0 D 0.673 neutral None None None None N
S/W 0.3472 ambiguous 0.3978 ambiguous -1.04 Destabilizing 1.0 D 0.679 prob.neutral None None None None N
S/Y 0.1946 likely_benign 0.2293 benign -0.749 Destabilizing 1.0 D 0.682 prob.neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.