Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7004 | 21235;21236;21237 | chr2:178724365;178724364;178724363 | chr2:179589092;179589091;179589090 |
N2AB | 6687 | 20284;20285;20286 | chr2:178724365;178724364;178724363 | chr2:179589092;179589091;179589090 |
N2A | 5760 | 17503;17504;17505 | chr2:178724365;178724364;178724363 | chr2:179589092;179589091;179589090 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.484 | D | 0.619 | 0.347 | 0.631438196984 | gnomAD-4.0.0 | 6.84325E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99591E-07 | 0 | 0 |
S/Y | None | None | 0.484 | D | 0.612 | 0.36 | 0.636706105328 | gnomAD-4.0.0 | 6.84325E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65717E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0952 | likely_benign | 0.0914 | benign | -0.895 | Destabilizing | 0.012 | N | 0.421 | neutral | N | 0.516167294 | None | None | N |
S/C | 0.1262 | likely_benign | 0.1251 | benign | -0.749 | Destabilizing | 0.78 | D | 0.608 | neutral | N | 0.49404103 | None | None | N |
S/D | 0.6362 | likely_pathogenic | 0.5962 | pathogenic | -1.404 | Destabilizing | 0.149 | N | 0.561 | neutral | None | None | None | None | N |
S/E | 0.633 | likely_pathogenic | 0.6013 | pathogenic | -1.243 | Destabilizing | 0.149 | N | 0.573 | neutral | None | None | None | None | N |
S/F | 0.2425 | likely_benign | 0.2109 | benign | -0.867 | Destabilizing | 0.484 | N | 0.619 | neutral | D | 0.528712517 | None | None | N |
S/G | 0.1051 | likely_benign | 0.1099 | benign | -1.257 | Destabilizing | 0.067 | N | 0.545 | neutral | None | None | None | None | N |
S/H | 0.3782 | ambiguous | 0.3445 | ambiguous | -1.625 | Destabilizing | 0.791 | D | 0.602 | neutral | None | None | None | None | N |
S/I | 0.1603 | likely_benign | 0.1598 | benign | 0.012 | Stabilizing | 0.081 | N | 0.609 | neutral | None | None | None | None | N |
S/K | 0.7294 | likely_pathogenic | 0.6974 | pathogenic | -0.287 | Destabilizing | 0.002 | N | 0.32 | neutral | None | None | None | None | N |
S/L | 0.129 | likely_benign | 0.1243 | benign | 0.012 | Stabilizing | 0.035 | N | 0.559 | neutral | None | None | None | None | N |
S/M | 0.2053 | likely_benign | 0.1877 | benign | 0.001 | Stabilizing | 0.555 | D | 0.6 | neutral | None | None | None | None | N |
S/N | 0.1946 | likely_benign | 0.1711 | benign | -0.894 | Destabilizing | 0.149 | N | 0.581 | neutral | None | None | None | None | N |
S/P | 0.9271 | likely_pathogenic | 0.9088 | pathogenic | -0.256 | Destabilizing | 0.484 | N | 0.589 | neutral | N | 0.514360557 | None | None | N |
S/Q | 0.5383 | ambiguous | 0.5115 | ambiguous | -0.769 | Destabilizing | 0.38 | N | 0.593 | neutral | None | None | None | None | N |
S/R | 0.5993 | likely_pathogenic | 0.576 | pathogenic | -0.556 | Destabilizing | 0.081 | N | 0.564 | neutral | None | None | None | None | N |
S/T | 0.0803 | likely_benign | 0.074 | benign | -0.616 | Destabilizing | None | N | 0.288 | neutral | N | 0.437394293 | None | None | N |
S/V | 0.1812 | likely_benign | 0.1711 | benign | -0.256 | Destabilizing | 0.001 | N | 0.477 | neutral | None | None | None | None | N |
S/W | 0.4071 | ambiguous | 0.3853 | ambiguous | -1.047 | Destabilizing | 0.935 | D | 0.702 | prob.neutral | None | None | None | None | N |
S/Y | 0.2264 | likely_benign | 0.207 | benign | -0.621 | Destabilizing | 0.484 | N | 0.612 | neutral | D | 0.532830258 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.