Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7006 | 21241;21242;21243 | chr2:178724359;178724358;178724357 | chr2:179589086;179589085;179589084 |
N2AB | 6689 | 20290;20291;20292 | chr2:178724359;178724358;178724357 | chr2:179589086;179589085;179589084 |
N2A | 5762 | 17509;17510;17511 | chr2:178724359;178724358;178724357 | chr2:179589086;179589085;179589084 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs771200026 | -1.139 | None | N | 0.228 | 0.161 | 0.18995819373 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 1.29249E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
R/K | rs771200026 | -1.139 | None | N | 0.228 | 0.161 | 0.18995819373 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.82E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/K | rs771200026 | -1.139 | None | N | 0.228 | 0.161 | 0.18995819373 | gnomAD-4.0.0 | 5.12608E-06 | None | None | None | None | N | None | 6.7659E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.3622 | ambiguous | 0.3225 | benign | -1.214 | Destabilizing | 0.007 | N | 0.323 | neutral | None | None | None | None | N |
R/C | 0.2913 | likely_benign | 0.2932 | benign | -1.21 | Destabilizing | 0.864 | D | 0.433 | neutral | None | None | None | None | N |
R/D | 0.6827 | likely_pathogenic | 0.6583 | pathogenic | -0.239 | Destabilizing | 0.016 | N | 0.359 | neutral | None | None | None | None | N |
R/E | 0.277 | likely_benign | 0.242 | benign | -0.138 | Destabilizing | None | N | 0.226 | neutral | None | None | None | None | N |
R/F | 0.603 | likely_pathogenic | 0.5665 | pathogenic | -1.246 | Destabilizing | 0.628 | D | 0.471 | neutral | None | None | None | None | N |
R/G | 0.3057 | likely_benign | 0.2863 | benign | -1.483 | Destabilizing | 0.024 | N | 0.365 | neutral | D | 0.525480211 | None | None | N |
R/H | 0.1284 | likely_benign | 0.1224 | benign | -1.606 | Destabilizing | 0.356 | N | 0.417 | neutral | None | None | None | None | N |
R/I | 0.2156 | likely_benign | 0.2009 | benign | -0.495 | Destabilizing | 0.136 | N | 0.494 | neutral | None | None | None | None | N |
R/K | 0.0625 | likely_benign | 0.0586 | benign | -1.147 | Destabilizing | None | N | 0.228 | neutral | N | 0.424507927 | None | None | N |
R/L | 0.2407 | likely_benign | 0.2277 | benign | -0.495 | Destabilizing | 0.031 | N | 0.382 | neutral | None | None | None | None | N |
R/M | 0.2044 | likely_benign | 0.1857 | benign | -0.643 | Destabilizing | 0.56 | D | 0.458 | neutral | N | 0.481766719 | None | None | N |
R/N | 0.4762 | ambiguous | 0.4187 | ambiguous | -0.517 | Destabilizing | 0.031 | N | 0.385 | neutral | None | None | None | None | N |
R/P | 0.9067 | likely_pathogenic | 0.905 | pathogenic | -0.716 | Destabilizing | 0.136 | N | 0.475 | neutral | None | None | None | None | N |
R/Q | 0.0965 | likely_benign | 0.0899 | benign | -0.826 | Destabilizing | 0.016 | N | 0.393 | neutral | None | None | None | None | N |
R/S | 0.3912 | ambiguous | 0.3415 | ambiguous | -1.438 | Destabilizing | 0.005 | N | 0.334 | neutral | N | 0.432223333 | None | None | N |
R/T | 0.1515 | likely_benign | 0.1324 | benign | -1.169 | Destabilizing | 0.024 | N | 0.402 | neutral | N | 0.395971744 | None | None | N |
R/V | 0.2906 | likely_benign | 0.2566 | benign | -0.716 | Destabilizing | 0.031 | N | 0.419 | neutral | None | None | None | None | N |
R/W | 0.2357 | likely_benign | 0.2313 | benign | -0.832 | Destabilizing | 0.828 | D | 0.446 | neutral | N | 0.507067808 | None | None | N |
R/Y | 0.4555 | ambiguous | 0.4154 | ambiguous | -0.54 | Destabilizing | 0.356 | N | 0.531 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.