Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7034 | 21325;21326;21327 | chr2:178724275;178724274;178724273 | chr2:179589002;179589001;179589000 |
N2AB | 6717 | 20374;20375;20376 | chr2:178724275;178724274;178724273 | chr2:179589002;179589001;179589000 |
N2A | 5790 | 17593;17594;17595 | chr2:178724275;178724274;178724273 | chr2:179589002;179589001;179589000 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | rs1409920305 | -1.264 | 0.042 | N | 0.489 | 0.259 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.48E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/E | rs1409920305 | -1.264 | 0.042 | N | 0.489 | 0.259 | None | gnomAD-4.0.0 | 1.59352E-06 | None | None | None | None | N | None | 5.67472E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0942 | likely_benign | 0.086 | benign | -0.928 | Destabilizing | 0.019 | N | 0.355 | neutral | N | 0.455116049 | None | None | N |
V/C | 0.6498 | likely_pathogenic | 0.6148 | pathogenic | -0.804 | Destabilizing | 0.859 | D | 0.537 | neutral | None | None | None | None | N |
V/D | 0.1602 | likely_benign | 0.1514 | benign | -0.278 | Destabilizing | 0.22 | N | 0.552 | neutral | None | None | None | None | N |
V/E | 0.14 | likely_benign | 0.1304 | benign | -0.339 | Destabilizing | 0.042 | N | 0.489 | neutral | N | 0.416960305 | None | None | N |
V/F | 0.1034 | likely_benign | 0.0931 | benign | -0.89 | Destabilizing | 0.124 | N | 0.58 | neutral | None | None | None | None | N |
V/G | 0.1462 | likely_benign | 0.1352 | benign | -1.159 | Destabilizing | 0.042 | N | 0.519 | neutral | D | 0.530421884 | None | None | N |
V/H | 0.2833 | likely_benign | 0.2541 | benign | -0.699 | Destabilizing | 0.667 | D | 0.588 | neutral | None | None | None | None | N |
V/I | 0.0752 | likely_benign | 0.073 | benign | -0.438 | Destabilizing | 0.055 | N | 0.407 | neutral | None | None | None | None | N |
V/K | 0.1424 | likely_benign | 0.1346 | benign | -0.644 | Destabilizing | 0.002 | N | 0.327 | neutral | None | None | None | None | N |
V/L | 0.1189 | likely_benign | 0.1044 | benign | -0.438 | Destabilizing | None | N | 0.161 | neutral | N | 0.452230459 | None | None | N |
V/M | 0.0855 | likely_benign | 0.0801 | benign | -0.384 | Destabilizing | 0.003 | N | 0.357 | neutral | N | 0.471779012 | None | None | N |
V/N | 0.1361 | likely_benign | 0.1256 | benign | -0.375 | Destabilizing | 0.22 | N | 0.576 | neutral | None | None | None | None | N |
V/P | 0.4407 | ambiguous | 0.4002 | ambiguous | -0.564 | Destabilizing | 0.364 | N | 0.546 | neutral | None | None | None | None | N |
V/Q | 0.1564 | likely_benign | 0.1435 | benign | -0.579 | Destabilizing | 0.011 | N | 0.337 | neutral | None | None | None | None | N |
V/R | 0.1296 | likely_benign | 0.1195 | benign | -0.182 | Destabilizing | 0.124 | N | 0.556 | neutral | None | None | None | None | N |
V/S | 0.1056 | likely_benign | 0.0959 | benign | -0.911 | Destabilizing | 0.002 | N | 0.327 | neutral | None | None | None | None | N |
V/T | 0.0954 | likely_benign | 0.0894 | benign | -0.858 | Destabilizing | 0.001 | N | 0.152 | neutral | None | None | None | None | N |
V/W | 0.5561 | ambiguous | 0.4854 | ambiguous | -0.977 | Destabilizing | 0.958 | D | 0.594 | neutral | None | None | None | None | N |
V/Y | 0.3663 | ambiguous | 0.3232 | benign | -0.671 | Destabilizing | 0.667 | D | 0.569 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.