Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7056 | 21391;21392;21393 | chr2:178724093;178724092;178724091 | chr2:179588820;179588819;179588818 |
N2AB | 6739 | 20440;20441;20442 | chr2:178724093;178724092;178724091 | chr2:179588820;179588819;179588818 |
N2A | 5812 | 17659;17660;17661 | chr2:178724093;178724092;178724091 | chr2:179588820;179588819;179588818 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs1306079131 | None | 0.031 | N | 0.237 | 0.107 | 0.381916209588 | gnomAD-4.0.0 | 6.84436E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99658E-07 | 0 | 0 |
V/M | rs1306079131 | None | 0.782 | D | 0.343 | 0.134 | 0.493089126863 | gnomAD-4.0.0 | 1.36887E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.52232E-05 | None | 0 | 0 | 8.99658E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.131 | likely_benign | 0.1366 | benign | -0.581 | Destabilizing | 0.003 | N | 0.205 | neutral | N | 0.484225447 | None | None | I |
V/C | 0.5999 | likely_pathogenic | 0.5966 | pathogenic | -0.764 | Destabilizing | 0.991 | D | 0.411 | neutral | None | None | None | None | I |
V/D | 0.1967 | likely_benign | 0.2137 | benign | -0.014 | Destabilizing | 0.906 | D | 0.555 | neutral | None | None | None | None | I |
V/E | 0.1851 | likely_benign | 0.1875 | benign | -0.093 | Destabilizing | 0.782 | D | 0.51 | neutral | D | 0.522031687 | None | None | I |
V/F | 0.0882 | likely_benign | 0.0873 | benign | -0.571 | Destabilizing | 0.826 | D | 0.417 | neutral | None | None | None | None | I |
V/G | 0.1403 | likely_benign | 0.1445 | benign | -0.758 | Destabilizing | 0.338 | N | 0.514 | neutral | N | 0.492680996 | None | None | I |
V/H | 0.3493 | ambiguous | 0.3522 | ambiguous | -0.232 | Destabilizing | 0.991 | D | 0.559 | neutral | None | None | None | None | I |
V/I | 0.0655 | likely_benign | 0.0658 | benign | -0.25 | Destabilizing | 0.002 | N | 0.185 | neutral | None | None | None | None | I |
V/K | 0.2024 | likely_benign | 0.2032 | benign | -0.5 | Destabilizing | 0.826 | D | 0.516 | neutral | None | None | None | None | I |
V/L | 0.1052 | likely_benign | 0.1056 | benign | -0.25 | Destabilizing | 0.031 | N | 0.237 | neutral | N | 0.457713637 | None | None | I |
V/M | 0.0994 | likely_benign | 0.0942 | benign | -0.388 | Destabilizing | 0.782 | D | 0.343 | neutral | D | 0.530864601 | None | None | I |
V/N | 0.1396 | likely_benign | 0.1481 | benign | -0.321 | Destabilizing | 0.906 | D | 0.556 | neutral | None | None | None | None | I |
V/P | 0.3589 | ambiguous | 0.3686 | ambiguous | -0.324 | Destabilizing | 0.906 | D | 0.539 | neutral | None | None | None | None | I |
V/Q | 0.1924 | likely_benign | 0.1895 | benign | -0.501 | Destabilizing | 0.906 | D | 0.536 | neutral | None | None | None | None | I |
V/R | 0.168 | likely_benign | 0.172 | benign | -0.035 | Destabilizing | 0.906 | D | 0.556 | neutral | None | None | None | None | I |
V/S | 0.1294 | likely_benign | 0.1373 | benign | -0.783 | Destabilizing | 0.404 | N | 0.497 | neutral | None | None | None | None | I |
V/T | 0.1388 | likely_benign | 0.1432 | benign | -0.751 | Destabilizing | 0.575 | D | 0.316 | neutral | None | None | None | None | I |
V/W | 0.6333 | likely_pathogenic | 0.6026 | pathogenic | -0.657 | Destabilizing | 0.991 | D | 0.627 | neutral | None | None | None | None | I |
V/Y | 0.3183 | likely_benign | 0.3153 | benign | -0.363 | Destabilizing | 0.906 | D | 0.403 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.