Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7073 | 21442;21443;21444 | chr2:178724042;178724041;178724040 | chr2:179588769;179588768;179588767 |
N2AB | 6756 | 20491;20492;20493 | chr2:178724042;178724041;178724040 | chr2:179588769;179588768;179588767 |
N2A | 5829 | 17710;17711;17712 | chr2:178724042;178724041;178724040 | chr2:179588769;179588768;179588767 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.136 | N | 0.233 | 0.068 | 0.296679040009 | gnomAD-4.0.0 | 1.59199E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8595E-06 | 0 | 0 |
I/V | rs1321725183 | -1.549 | 0.267 | N | 0.383 | 0.139 | 0.415055319159 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.81 | likely_pathogenic | 0.804 | pathogenic | -2.127 | Highly Destabilizing | 0.688 | D | 0.555 | neutral | None | None | None | None | N |
I/C | 0.9365 | likely_pathogenic | 0.9456 | pathogenic | -1.512 | Destabilizing | 0.998 | D | 0.644 | neutral | None | None | None | None | N |
I/D | 0.9828 | likely_pathogenic | 0.9885 | pathogenic | -1.404 | Destabilizing | 0.991 | D | 0.721 | prob.delet. | None | None | None | None | N |
I/E | 0.971 | likely_pathogenic | 0.9795 | pathogenic | -1.32 | Destabilizing | 0.974 | D | 0.716 | prob.delet. | None | None | None | None | N |
I/F | 0.3261 | likely_benign | 0.3571 | ambiguous | -1.459 | Destabilizing | 0.801 | D | 0.617 | neutral | D | 0.532558112 | None | None | N |
I/G | 0.963 | likely_pathogenic | 0.9678 | pathogenic | -2.544 | Highly Destabilizing | 0.974 | D | 0.721 | prob.delet. | None | None | None | None | N |
I/H | 0.9441 | likely_pathogenic | 0.9542 | pathogenic | -1.783 | Destabilizing | 0.998 | D | 0.666 | neutral | None | None | None | None | N |
I/K | 0.9271 | likely_pathogenic | 0.9434 | pathogenic | -1.383 | Destabilizing | 0.949 | D | 0.719 | prob.delet. | None | None | None | None | N |
I/L | 0.1668 | likely_benign | 0.16 | benign | -1.003 | Destabilizing | 0.002 | N | 0.119 | neutral | N | 0.471160149 | None | None | N |
I/M | 0.2398 | likely_benign | 0.2232 | benign | -0.892 | Destabilizing | 0.136 | N | 0.233 | neutral | N | 0.486124083 | None | None | N |
I/N | 0.864 | likely_pathogenic | 0.8997 | pathogenic | -1.309 | Destabilizing | 0.989 | D | 0.731 | prob.delet. | N | 0.518560385 | None | None | N |
I/P | 0.855 | likely_pathogenic | 0.8883 | pathogenic | -1.35 | Destabilizing | 0.991 | D | 0.729 | prob.delet. | None | None | None | None | N |
I/Q | 0.9295 | likely_pathogenic | 0.944 | pathogenic | -1.385 | Destabilizing | 0.974 | D | 0.732 | prob.delet. | None | None | None | None | N |
I/R | 0.8772 | likely_pathogenic | 0.9054 | pathogenic | -0.926 | Destabilizing | 0.974 | D | 0.713 | prob.delet. | None | None | None | None | N |
I/S | 0.8551 | likely_pathogenic | 0.8749 | pathogenic | -2.083 | Highly Destabilizing | 0.891 | D | 0.661 | neutral | N | 0.482832401 | None | None | N |
I/T | 0.8727 | likely_pathogenic | 0.8801 | pathogenic | -1.863 | Destabilizing | 0.801 | D | 0.601 | neutral | N | 0.499949151 | None | None | N |
I/V | 0.1163 | likely_benign | 0.1035 | benign | -1.35 | Destabilizing | 0.267 | N | 0.383 | neutral | N | 0.484945541 | None | None | N |
I/W | 0.9547 | likely_pathogenic | 0.959 | pathogenic | -1.568 | Destabilizing | 0.998 | D | 0.662 | neutral | None | None | None | None | N |
I/Y | 0.8235 | likely_pathogenic | 0.8504 | pathogenic | -1.33 | Destabilizing | 0.974 | D | 0.689 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.